Aethina tumida (small hive beetle): 109598361
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Entry
109598361 CDS
T06105
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109598361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atd03021
]
109598361
03019 Messenger RNA biogenesis [BR:
atd03019
]
109598361
Transcription machinery [BR:
atd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109598361
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109598361
U7-dependent histone pre-mRNA processing factors
109598361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
MLLE
Ino80_Iec3
Motif
Other DBs
NCBI-GeneID:
109598361
NCBI-ProteinID:
XP_019869812
LinkDB
All DBs
Position
4:complement(join(2325311..2325379,2325438..2325719,2325777..2326955,2346739..2347032,2347344..2348112,2348172..2348561,2348615..2348811,2348867..2348890))
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AA seq
1067 aa
AA seq
DB search
MDGIDENEVVECFNEAATCRDNAERLKLFLKIQEFLIHRSPNLLPKYLQNVLNFTSDKSG
DIKKALVGFIEEVCKLRESLIPKIMLCLHLLLCDESIPVQKRVIQAAITIYRKTLAWLCK
ATNINEEMEAAWKQLSTIKLEIANMIDSDNDGIRTSSVKFLECVILLQTHPDEVENKREN
DFSLDDVPMTLKIARRRRLEEEADNLFDVLVKFHGSPHISSANLLACIGVLRTIAKSRAN
YMEKVVGAINSLFNNLPPTLTTTQQNAVRKKLKSELCGLIKHPAAYEFIDKITPMLLELG
CTQSEITKLTPKPEDMKKYTKRTLPAESYLHQSKKPRLDTNFDYDNDTNDSPSVELTPLE
ANDQFVQDNLTLEKTVYLIITSIPKLPSTMPQEFAREYNKFVQSGSIGKSHLASILAKQF
LENGVGPGAQMISNEKAPEQPASRKRERDIDDQEKEPEPKVAKKEKLKMPKIKTLKLNEI
TKPLEQGTKETMLVSSVKRILSSEKSVIQNAYQKIATLFATTFDPMVRDAILSHLLSDLK
SHIELAIALLYEEYSIMQRFTKIPQVRKGSRPDQGYNKLFSIFINSSSHDPVIINKLLME
SPMVTDEAMHQIKDMCTDETRSRWVFNLLRDLTLRKPPKQLTYLNTLLSYTTYESNTIRD
NAISRVLELHKRPKLSLIIEEFARMNMEFLKLPSPPDSLSGPDQGRLKGETWSDDYIKAC
LLPYISLLPGNSSLIHDLSKVYVATNPDIKRVILRLIEAPVRTMGMDNPELLKLVEDCNK
GSETLVTRVIHVLTDKGLPSPQLVQRVRELYNTRVNDVRFLIPVLNGLTKKEVIAALPKL
IKLNPVVVREVFNRLLGLHGESPISPTDLLVALHVIDTNKAELKTVIKATSMCLQEKQVY
TQEVMAVVLQQLMEQTPIPTLLMRTVIQSLGSYPRLSGFVMNILQRLILKQVWKNKVVWE
GFVKCCQRTVPQSFAVLMQLPPLQLNEALAMCPQLKEPLRDHLLTFTDGQRAHIPITIQE
IVLGQYRPQPVPPPKPMEISANDFPIPAKSPPPIMVAPTEPLPPGME
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggacgggatcgatgaaaatgaggtggttgagtgttttaatgaagccgcaacttgcagg
gacaatgccgaaagactcaaattatttcttaaaatacaggaattccttattcacagatcc
ccaaatttattgccaaagtatctgcagaatgttttgaacttcacgtcagataaaagtggt
gacataaaaaaggcattagttggctttattgaagaagtctgcaagttaagagaatctctt
attccaaaaatcatgctgtgtctgcaccttttgctttgtgatgagtcaatcccagttcag
aagcgagtaatccaggctgccattacaatatacaggaaaacattagcttggttgtgcaaa
gccaccaatattaatgaagaaatggaagcagcatggaagcagttaagtactattaagcta
gaaattgccaacatgattgatagtgacaatgatggaataaggacaagttcagtgaagttc
ttagaatgtgtaattctattgcaaacccatcctgatgaggtagagaataagcgcgaaaac
gacttctcactggatgatgtgcctatgactctcaaaattgccagaaggcgaaggctagaa
gaggaggcagataatttgtttgatgttctggttaagttccatgggtccccacacatcagt
agtgctaatttgttggcctgtattggagtattaaggacaattgctaaaagcagagctaat
tatatggaaaaagtggtgggtgctattaattcattgtttaataacttgccacccacttta
accacaactcaacaaaacgccgttcgaaagaaattgaaatccgaattgtgcggcttaata
aaacatccagcagcctatgaattcattgataaaataactccaatgctcctggagctgggt
tgtacacaatctgaaatcaccaaacttactccaaaacctgaggacatgaagaagtatacc
aaaaggacacttccagcagagtcttacctgcatcagtctaagaaacctagattagataca
aattttgattatgataatgacactaatgattcaccatcagttgaactcaccccacttgaa
gctaatgatcaatttgtacaagataatttaacgttggaaaagactgtttatttaattata
acttcaatacccaaacttcctagcacaatgccccaagaattcgccagagagtacaacaaa
tttgttcaaagtggtagtattggaaagtcccatttggccagtattttagccaagcagttt
ttggaaaacggcgttggacctggggctcaaatgatcagtaatgaaaaagcaccagaacaa
ccagcaagcaggaagcgtgaacgagatattgacgaccaagaaaaggaaccggagcctaag
gtcgcaaagaaagagaaattaaaaatgccgaagatcaagaccttaaaactgaacgaaatc
acaaaaccattggaacaggggacgaaggaaacgatgctggtgtcgagcgttaaaaggatt
ttgtctagtgagaaaagtgttattcaaaacgcttaccaaaaaattgccaccctgtttgcc
accaccttcgacccaatggtcagagatgcgatcctgagccatctgttgtcggacttgaag
tcgcacatcgagttggcaattgcactcctctatgaagagtacagcatcatgcagagattc
acaaagatcccccaagtccgcaaagggtccaggccagaccagggttacaacaagctcttc
tccattttcattaattcatcctcccatgaccccgtcatcatcaacaagctcctcatggag
tcacccatggtcaccgacgaagccatgcaccaaattaaggacatgtgcacggacgaaaca
cgcagcagatgggtgttcaatctcctaagagacctcaccctcagaaaaccacccaaacaa
ctgacctacctcaacacgctgctctcgtatacaacatacgagtccaacacgataagagat
aacgccataagtcgcgttttggagttacacaagcgacccaaactgagcttaatcatcgag
gagttcgcccgaatgaacatggagtttttgaagcttcccagccctcccgactcgttaagt
ggcccggaccaaggcaggttgaagggtgaaacttggagcgacgactacatcaaggcatgt
ctcttgccttacatatcattacttcccggcaacagcagcctaatccacgacctttccaaa
gtttacgtggcaaccaacccggacatcaaaagagtaattctgcgactaatagaggctccg
gtgcgcaccatggggatggacaaccccgaattactcaagttggttgaagactgcaacaag
ggttccgaaacgttggtcactcgagtcatccatgtccttaccgataagggactgccgtct
ccacagttagtgcagagagttagggagttgtataacacgagagtcaacgatgttcggttt
cttataccggtcctcaatgggctgactaagaaagaagtgattgcagccttacccaaactg
attaaactcaaccccgtggtcgtacgagaagtgttcaatcgattgttgggtctccacggc
gagagccccataagcccgactgaccttttggtggccttacatgtcattgatactaacaag
gcggaactgaagacggtcattaaggccacctcaatgtgccttcaagaaaaacaggtgtat
actcaggaagttatggctgtggttttgcaacagttaatggaacagacccccataccaacg
ttgttgatgaggaccgtaatccagtctctaggaagttaccctcggttgtcagggttcgtc
atgaacatccttcaacgcctaattctcaaacaggtatggaagaacaaagtggtgtgggaa
ggcttcgtgaagtgttgccaaagaacggtgcctcaaagtttcgccgtactgatgcagctg
ccgcccttgcagttgaatgaagcactggcgatgtgtccgcagctgaaggagcctctgcgt
gaccacctcctaaccttcaccgatggtcaaagagcccacattcccataactatccaagag
atagtgttaggacaatacagacctcagcccgtgccacctccaaaaccgatggaaatatca
gctaacgattttcctattcctgcgaagtccccaccgccaatcatggtggctcctacggag
cctctaccacctgggatggaatag
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integrated database retrieval system
