Aethina tumida (small hive beetle): 109598451
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Entry
109598451 CDS
T06105
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109598451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atd03021
]
109598451
03019 Messenger RNA biogenesis [BR:
atd03019
]
109598451
Transcription machinery [BR:
atd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109598451
RNA polymerase I system
109598451
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
109598451
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW6_SPT5
KOW
KOW7_SPT5
Spt5-NGN
KOW5_SPT5
KOW2_Spt5
KOWx_SPT5
Spt5_N
CTD
GPKOW_C
DUF3912
DarP
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
109598451
NCBI-ProteinID:
XP_019869923
LinkDB
All DBs
Position
6:complement(join(18160862..18161916,18162022..18163688,18163752..18164072,18164134..18164309))
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AA seq
1072 aa
AA seq
DB search
MSDSEASAYSDNENGSEAGSVRSRSSRGSARSRSRSPSRSPSRSRSRSRSRSRSGSRSGS
EAREARSGGEDVADEEEPEGESLDEDEYDSEEDESDDGRPAKRKKGHKDRFRDFIIDEAE
VDDEVEDEDEWEDGAQEIGIVPNEVDEFGPTAREIEGRRRGTNLWDAQKEHEIEEYLRKK
YADDTAAARHFGDGGEEMSDEITQQTLLPGVKDPNLWMVKCRIGEEKATCLLLMRKFLAF
QNTSEPLQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGMWTQQMVPIKEMTDV
LRVVKEQTGLKSKQWVRLKRGLYKDDIAQVDYFDMAQNQVHLKLLPRIDYTRLRGALRTT
QTESEAEKRKKKRRPPSKPFDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKNFTMSA
VLIEGVKPTLAELERFEEQPEGIDLELSTEKEDKVVTHSFSAGDNVEVCEGELINLQGKI
ISIDGSVIAMMPKHDDLKESLYFQANELRKYFKMGDHVKVLAGRYEGDTGLIVRVENNRV
VLISDLTMHEMEILPKDLQLCTDMASGVDSLGKFEWGDMVNLDAETVGVIVRLERENFHV
LNMHGKVVECRPGSLQKRRLNRFTAALDSYRNSLHRRDMVKVIDGPHNGFSGEIKHLYRN
FAFLYSRTYLQNGGIFVCKTKHLQLAGGTKNLPSAELGSGMEFMSPRRASPMHPSSGGGG
GGGFSAPIGGGGGGGGGRGRGRVTRDRDIIGTTIKITRGPYKGNIGIVKDATQATARIEL
HTSCQTISVDRNNIADVGATAGKEGSFTSYGKTPSYAGNQTPLYRDTGNKTPMCDSGSRT
PLHYGSMTPLHDGSRTPNAHSEWDPSISNTYPSPGYNPSTPGYQMNGPFTPQTPGTMYES
TYSPYQTSPGYQSAISTPSPGTGYGQSPASNNPYNTPSSGYSPNMQYNPQTPGAGLDVLP
MTDWHTVDIEVRIRDSHDDAGLVGQTGVIQSISGALCSVFLPEEDRVVTIMSDHLDPVTP
QRGDEFKVIIGEEREATGELLSIDVLEGVVKIKEEIKMLPLQNLCKMRKAEH
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcggaggcgagcgcgtactccgacaatgagaatggatcggaggcgggttcg
gtgaggtcccgcagctctcgtggcagtgcgcgcagtcgcagtcgctcaccgtcccgttcg
ccgtccagaagccgttcgcgcagccgcagtcgcagccggtccggaagtcgatctggttct
gaggcgagggaggcacgttctggcggcgaagacgtggcggacgaggaggagccagaagga
gaaagcttagacgaagatgagtacgacagcgaagaggatgaaagcgacgacggacgtccg
gccaagcgtaagaaaggtcacaaggaccggttcagggatttcatcatcgacgaggccgaa
gtagacgacgaagtcgaagatgaggacgaatgggaggatggtgcccaggaaatcggcatc
gtgcccaacgaagtggacgaattcggtcccacagctcgggaaatcgaaggcagaagacgt
ggcaccaatctgtgggatgcacagaaggagcatgaaatcgaagagtacctcaggaagaag
tacgccgacgacacagcggctgcccgtcattttggagatggtggcgaggaaatgtcagac
gaaattacgcaacaaaccttgttgcctggggttaaagaccccaacttgtggatggttaag
tgcaggataggcgaggaaaaggccacctgtttgttgctgatgaggaagttcctggcgttt
caaaacactagcgaacccctacaaattaaatcagttgtcgcccctgaaggtgtaaaaggt
tacatctacattgaagcctataaacaacctcatgttaaggcggcgatagaaaacgtcggt
aacttaaggatgggcatgtggacccagcaaatggttcccattaaagaaatgacggacgtt
ttaagagtggtcaaagaacagactggtcttaagtccaaacagtgggtcaggctcaagcgt
gggttgtacaaagacgacattgctcaagtggactactttgacatggcccagaatcaagtc
cacttaaaattactcccgaggattgactatacgaggctgaggggtgccctcaggaccacc
cagactgagtcagaggcggaaaagaggaagaaaaaacgtaggccgccaagcaagcctttt
gatcccgaagcaatccgtgctatcggcggagaagttacttcggatggtgacttcttgatt
ttcgaaggcaacagatactcccgtaaagggttcttgtacaaaaacttcaccatgagtgcc
gtgctgattgaaggagtgaaaccaacgttggcggaactcgaacgcttcgaggaacaaccc
gagggcatagacttggagttgtccacggagaaagaggataaagtcgtgacgcattccttc
agcgccggcgacaacgtggaggtatgtgagggtgaattgatcaacctgcaaggtaaaatc
atcagcatagacggctcggtgattgccatgatgcccaaacacgacgacttgaaggagtcg
ttgtacttccaagctaacgagctgaggaagtacttcaaaatgggtgaccacgtcaaagtg
ttggcgggccgttacgagggtgacacaggtctgattgtacgggttgagaacaacagggtg
gtgctgatttctgacttgacgatgcacgaaatggagatcctgcctaaggatttacagttg
tgcactgatatggcgtcaggtgttgattctttgggtaaattcgaatggggtgacatggtt
aatctggacgctgaaactgtgggcgtcattgtaaggcttgaacgtgagaatttccatgtt
ttaaacatgcacggcaaggttgttgaatgtagacctggttcgttacaaaaacggcgattg
aatcgcttcacagccgccctggattcgtatcgcaacagtttacatcggagggatatggtc
aaagttatcgatgggccgcataacggtttctcaggggagataaaacatttgtacaggaat
tttgccttcctgtactcccgtacgtatttacagaacggtggtatcttcgtttgtaagaca
aagcacttgcaactggctggtggtaccaagaacttgccgagtgctgaacttggttctgga
atggagttcatgtcgcccaggagggcgtcacctatgcatccgtccagtggcggaggcgga
ggaggaggtttctctgctccgattggcggcggcggaggcggaggaggaggtcgcggacga
ggcagggtgacccgcgaccgcgacatcatcggtaccaccatcaaaataacacgtgggcct
tacaagggcaatatcggtatcgtcaaagacgccactcaagcaacagcacgtatcgaactg
cacacctcctgtcaaaccatatcggtggacaggaacaacatcgcagacgtgggggccacc
gctggcaaagaaggcagcttcaccagctatggcaagactccctcgtacgccggcaaccag
accccattgtacagggacactggcaacaaaacaccgatgtgcgattccggttccaggaca
cctctgcattacggttcaatgacgccactgcacgacggctctcgcacccccaacgcccac
tcggaatgggacccgagcatctccaacacatacccaagtcctggctacaatcccagcact
cctggctaccagatgaacggtcccttcacgccgcaaactcccggtacgatgtacgagagc
acctacagcccctaccagacctcgcctggttaccagagtgccatttccacccccagtccg
ggcacaggttacggccaaagtccggctagtaataatccgtacaacacccccagctctggc
tacagccccaacatgcagtacaatccccagacaccgggagccggtttggacgtcctaccc
atgaccgactggcacaccgtcgacatagaagtacgaatcagggatagtcacgatgacgca
ggcctggtgggacaaacgggcgtgatccagagcatttccggcgccctttgttccgttttt
ctgccggaagaggaccgtgtcgttaccattatgtcggatcatttggatccggtgacgccg
cagcgtggcgacgagttcaaagttattatcggggaggagagagaggcgaccggcgagctc
ttgtccattgatgtgctagaaggtgtcgttaagattaaggaggagattaagatgttgccg
ctgcaaaacctatgcaagatgaggaaggcggagcactaa
DBGET
integrated database retrieval system
