Aethina tumida (small hive beetle): 109598673
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Entry
109598673 CDS
T06105
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109598673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109598673
03012 Translation factors [BR:
atd03012
]
109598673
Enzymes [BR:
atd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109598673
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109598673
Translation factors [BR:
atd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109598673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_N
HA2_C
nSTAND3
AAA_22
ATPase
AAA_14
AAA_19
AAA_7
Sigma54_activat
NB-ARC
EpsG
PhoH
ATPase_2
T2SSE
AAA_16
NPHP3_N
AAA_34
NACHT
SRP54
Motif
Other DBs
NCBI-GeneID:
109598673
NCBI-ProteinID:
XP_019870138
LinkDB
All DBs
Position
1:join(79565283..79565561,79565613..79565965,79566018..79566218,79566352..79566886,79566936..79567727,79567801..79568084,79568148..79568552,79568618..79568693)
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AA seq
974 aa
AA seq
DB search
MSENNFNQKKQYENQSSTSQYPSRFTERILGKTHRGSYKKNKQNRNKHGEVSGSTENRIQ
RPPGLKGKEIGLFYKNLMHKTDEQKAKMMKNRTFGEILLSDIRKEQIQSILSCNTYKNID
VDTVNYSHMKDTQFKHEFVKTIRGNISDNLKPPVNIESMPEIDEELYNQHRAKLNQPKFI
NMLNIRKRLPSYDKKEELLKIIDENQVVLISGETGCGKTTQVAQFILDDYIERKRGSLCK
IICTQPRRISAISVAERVAEERVENLGQSVGYHIRLEKVHPRERGSICYCTTGVILRIMQ
SDPCLTGVSHLILDEIHERDVLSDFILTILKRVIAVRKDLKLILMSATLNAESFCKYYND
CPHINIPGFTYPVEEYYLEDVIEMTQFTYNDERRRGAERKWRNKKTYIGGDIDKYVDSLE
RERKYSKHTCNMLRLSESEEFNVDLIYFLLLEICKKGDKEGAILVFVTGFMEISSLNTRL
EKSTMFPSNKYLIFPLHSLMPSIDQKRIFQPAPPGVRKIILSTNIAETSITIDDVVYVID
CGKIKMSNYDTTNNSQTLVPEWVSLANASQRKGRAGRVRPGICYHLFTREREKHLQPFQK
PEILRKRLEDVILTAKMLQLGKIREFLPHLLDPPEDSTVNHSLELLEKLNALDENENLTP
LGYHLAKLPMGPQTGKMILFGAIFSCLDPILSVATALDYKDAFQLPLGKEQEADRKRREL
AMGWNSDHLLQHIVLDRFEKSPNPRQFCWNYFLSYPILKQQQDMKRQFMGYLHDMNFVSS
MNPKSPELNVNSENLSLIKAVVCAGLYPNVAVYHRKKKRGATVKGGKLTDLEMRKLDFHP
KSVLSKVSNPESLLFVYYLKQRSCCNYIHDATMISPLPLVFVGDKLTQLKNEKGQPVLMI
CDKLTFKCSESTAELIKDLRQKLDWFLEYKISHPGYINWREDTYEINLLRAIMELITCED
LGDYDSDCLEDLLN
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaataatttcaatcaaaagaaacaatatgaaaaccaaagttcaacctctcag
tatccgagtcgcttcactgagagaattctaggaaaaactcatcgcggctcgtacaagaaa
aacaagcaaaacaggaacaaacatggtgaagtttcaggaagcactgaaaacagaatacaa
agaccacccggcttaaaaggaaaggagattgggttgttttataaaaatttaatgcacaaa
actgatgagcagaaagctaaaatgatgaaaaatcgaacttttggagaaattctattgtct
gacattagaaaagaacaaattcaaagtattttaagctgtaacacttacaagaatattgat
gtggatactgttaattattctcatatgaaagacactcagtttaaacatgaatttgttaaa
accattaggggcaacataagtgataatttaaaaccaccagtaaatattgagagtatgcca
gaaattgatgaagaactttataatcaacacagagctaaattgaatcaacctaaatttatt
aatatgttaaatattcgtaaaaggttaccatcgtatgacaaaaaagaagaactattgaaa
ataattgatgaaaatcaagttgttctaataagtggtgaaactggatgtggaaaaacaaca
caggttgcacagttcattttagatgattacattgaaagaaagcgcggatcactatgtaaa
attatatgtacacaaccaagaagaattagtgcaatttccgttgccgaaagagttgctgaa
gaacgggtcgaaaatctgggacaaagtgttggttatcacatcagattggagaaagttcat
ccaagagaaagaggctctatctgttactgcacaactggagtaattttacgtataatgcag
tcagatccgtgtttaactggagtttcacacttgattctcgatgaaatacatgaacgggac
gtcctttcagactttattctgaccatcctaaagagagtaatcgccgttcgaaaagacctc
aagttaattctgatgagtgccaccttaaacgcagaatctttctgtaaatactacaatgat
tgtccccacataaacataccaggatttacgtatccagttgaagagtattatttagaagat
gtgattgagatgacacaatttacttataacgatgagaggaggagaggagctgaaagaaag
tggcgtaacaaaaaaacatatattggtggtgatattgataagtatgttgatagtttagag
cgcgagagaaaatatagtaagcacacttgcaacatgctcagattgtcagagagtgaagaa
tttaatgttgatttaatctactttttgcttttagaaatttgtaaaaagggtgacaaagaa
ggtgcaattctcgtgtttgtcacaggtttcatggagatctcgtcgttaaacacgcgcctt
gaaaagtcgacaatgtttccgtcaaataaatatttaatatttccattacattccttaatg
ccttcaattgaccaaaaaaggatttttcagcctgccccaccaggcgttagaaaaataatt
ttatctacgaacattgctgaaacgtctattacaatcgatgacgtggtttatgtaatcgat
tgcggaaagataaagatgtcgaattacgacacaacgaacaactcgcaaacattagtaccg
gaatgggtctctttggcgaatgcgagtcagagaaaaggccgtgccggtagagtacgacct
ggaatttgttaccatttgttcacgagagagcgcgaaaaacatttgcagcctttccaaaag
ccggaaatcttgcgtaaacgtctcgaggatgttatattaactgctaagatgttacaattg
ggcaaaatcagagagttcctgccacatctcttggatcctccagaggactccactgtcaat
cactctcttgaacttttggaaaaacttaacgcattggatgagaacgaaaatttaactcct
ttaggttatcatttggcgaaattaccgatgggaccgcaaactggaaaaatgatattgttc
ggggcgatttttagttgccttgatcctatattatcggtcgccacagccctcgattacaaa
gacgcgtttcagttacctttagggaaagaacaggaagcggacaggaaaagacgcgaactg
gctatgggttggaacagtgatcatctgttgcaacacatcgtcttggatcgattcgaaaag
tctccgaacccacgacaattttgctggaattattttcttagttacccaattctcaaacaa
caacaagacatgaagcgacaatttatgggttatttacacgacatgaattttgtctccagt
atgaatcccaaaagtccggaacttaatgttaactcagaaaacttaagtttgataaaagct
gtggtatgcgctggactctatcccaacgtagcggtttatcataggaaaaaaaagcgtggc
gccactgttaaaggcggaaaattgactgatctggagatgcgaaagttagattttcatccg
aaatccgtactttcgaaagtttcgaaccccgaatccctcctcttcgtctactatctcaaa
caacgttcttgttgcaattacatccacgatgccacgatgatttcgcctttacctttagtt
ttcgttggggacaaactgacacagttaaagaacgaaaagggacaacctgtgttgatgatt
tgcgataagttgacctttaaatgttcggaaagtactgccgaattgattaaggatcttaga
cagaaacttgattggtttttggagtataaaatatcacatcctggctacattaactggaga
gaggacacttacgaaattaatcttcttagagcaataatggaacttattacttgcgaggat
ttgggtgattatgactccgattgtttggaagatctgttgaattag
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