Aethina tumida (small hive beetle): 109599513
Help
Entry
109599513 CDS
T06105
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K11644
paired amphipathic helix protein Sin3a
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109599513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atd03036
]
109599513
Chromosome and associated proteins [BR:
atd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
109599513
REST complex
109599513
Heterochromatin formation proteins
Other heterochromatin formation proteins
109599513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
109599513
NCBI-ProteinID:
XP_049822330
LinkDB
All DBs
Position
1:complement(join(45778084..45778332,45779926..45780954,45781019..45781203,45781265..45781502,45781580..45782947,45783128..45784216))
Genome browser
AA seq
1385 aa
AA seq
DB search
MKRTRVDETLKEGSGPSLSGSIYGQPLQNSSPLSYSSSGGSTVKVVSEGMQSRLLPPSAP
VSYGPMPTATASHAGKPQAMQSISVGSAHSQLRNSSGGPSPQLSDSPQSQQSQSPGGGGG
NFQRLKVEDALSYLDLVKFKFGTKPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGFP
ELIVGFNTFLPPGYKIEVQRSDQGYAFQVSVSMPSPTGTMNSDPQQQKSAMILTGGGTIN
MSGGGGPVSVPPPPSNSAPAAAAAAAAAVAQPQPLALPPQHVQTATITPQPAPTPVAPVV
HHTPAPAASAYGGSTGNAPPYNTLSLSAAQAAVNHALHGGHTDAPQNQPVEFNHAINYVN
KIKNRFQGQPEKYKRFLEILHTYQKEQRTLKDGSTVGTGGQHLTEKEVYSQVAKLFENQS
DLLTEFGQFLPDATSHINQQPTSEHPLPLKKPQNKPYREHIVDRHLSHKQSSHIIIQERK
RSPPYPNVLHRDAPPPKKHKLSTSCRDVTLSEAGKYGTLNDYAFFDKVRKAMRAPEVYNN
FLRCLTLFNQEIISKSELNQLVVPFLGKFPELLRWFREFLGQNDVEAIPYNACRTDRPTG
DHALEIDLATAKRLGASYCIIPKAQEGLKCSGRTQLCKDVLNDQWVSFPTWSEDSTFVSS
RKTQYEEYMYRCEDERFELDVVIETNASTIRVLEGVNKKLSRMSSDEVARYKLDDSLGGQ
SQTQHQRALKRIYGDKAQDIIDGLKRNPSIAVPVVLRRLKAKEEEWREAQKGFNKIWREQ
NEKYYLKSLDHQGINFKQTDVKALRSKSLFNEIETIFDERHEQNEDGVEPIVGPHMVLVY
KDRTILDDASNLLIHHLKRQTGIQKGEKRRIKHLLRQFLPDLFFHPRQQLSDDEREDDEE
KEDCDDSSDNSPRGDSKIKVENISPGKSPGRCDGDNVDVKSEDQRDVDVKVPLHARVSDP
EECYTLFMANNNWYIFLRLHAILCERLAKIYERAVILVSEEVNSKGSRKESTAVALRLKP
KPQIEVEAYYPAFLDMVKNLLDGNMEANTYEDTLREMFGIHAYIAFTLDKVVSYAVRQLQ
HCVTERTAIACTDLFLKEYKRGAAGGLCATAYKRSFLELGYQRAAEKAVQEENCFKIYIY
KKDCRMTIELLDTEPEDQSKKVEDAKKWSEYKEAYTDITNTDCKARSPVYLNRNIQVKKE
TSESPPNRERGQRKNASSDCNDRSKDDKRGSSKTDENDYSIFDELERKLNERASPERNQT
KHPGYVVSDDTECNFNVNNSKIAFTYNKDSYIYKMSAFSRARKSHPSITKRKAARFRSWL
KEWTAEHVTDSQHKHCVDWLMGRCEGVVPNKTRVVTDNDLSRTPYAPYNRYRVRLSSADG
HSDST
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggacgcgtgtggatgagacattgaaggaaggaagtggaccatcgctatcgggt
agcatatacggacagcctttacaaaactcatcgccattgtcatattcgtcaagcggtggc
agtacagtgaaagtggtcagtgaaggtatgcaatcgagactattgccgccgtcggcacca
gtaagctacggcccgatgccgaccgcaactgcgagccacgcgggtaagccgcaagccatg
cagtctatatctgtgggcagcgcccattcgcaactacgaaattcatcaggtggccctagt
ccgcagctcagcgattcaccacaatcgcaacagagccaatctcccgggggtggcgggggt
aattttcaacgactcaaagtcgaagacgctctgtcgtatttagatttggttaaatttaaa
tttggtaccaagccacaagtttacaacgactttttagacatcatgaaggagttcaagagt
cagagcatcgacacgcccggtgtgatacaacgcgtgtcaaatctttttaagggttttcct
gaattaattgtcggttttaatacgtttctgccgcccggttacaagatcgaagtgcaacgc
agtgatcaggggtatgcgttccaggtctcagtcagcatgccaagtcccacaggtaccatg
aattcagatccgcaacagcaaaaatcagcaatgatccttacaggcggtggcacgataaac
atgtcgggaggtggcggaccggtctccgttccaccgcctccgtccaattcagcgccggcc
gccgctgctgctgctgccgccgccgtcgcacaaccgcagccgctcgcattgccgccgcaa
cacgtgcagaccgccaccataacaccgcaaccggcaccgacgccggtcgctccagtcgtg
caccatacgccggctcccgcagctagcgcatatggaggaagtactggtaacgcaccccca
tacaacacactatcgctgtcggccgcgcaggccgcagtcaaccacgccctgcacggcggc
cacacggacgccccacaaaatcaacccgtcgaatttaatcacgcaatcaactatgttaac
aaaatcaagaaccgctttcaaggccagccagagaagtacaaaaggttcctggagatcctg
cacacgtaccaaaaggagcagcgcacactgaaagacggttcgacagttggcacgggaggt
cagcatctgaccgaaaaggaggtctacagccaggtggcgaagctgttcgagaatcaaagc
gatttactgaccgagttcggtcagttcctgcccgacgccacgagtcacataaaccaacaa
cccacgtcggagcatcccttgccgctaaagaagccgcagaacaagccgtacagggagcac
atcgtcgaccgacatctcagtcacaaacagtccagtcacatcataattcaggagaggaaa
cggtcgccgccgtatccgaatgtgttgcaccgcgacgcgccgccccccaaaaaacacaag
ctgtcgacttcgtgccgcgacgtgacgctcagcgaggccggcaagtatggtacgctgaac
gactacgcgttcttcgacaaagtgcggaaggcgatgcgcgcgcccgaagtatacaataac
tttttgcgttgtttgacgctgttcaatcaggagatcatctcgaaatctgaattgaatcag
ttggtggtgccgtttttgggtaagtttcccgaattgttgcggtggtttcgcgagttcctc
ggacaaaacgacgtcgaagcgataccgtacaacgcgtgcaggacagatcgacccacgggc
gatcacgccttggaaatcgatttggcgacggccaaacgtctgggcgccagttattgcatt
attcccaaagcacaggaaggactgaagtgttcgggtaggacgcagttgtgtaaagacgtg
ctcaacgaccagtgggtgtcgttccccacctggtcagaggacagcacattcgtgagttcc
aggaagacgcagtacgaagagtacatgtaccgatgtgaggacgaacggttcgagttggat
gtcgtgatcgaaacgaacgcgtccacgatccgggtgttggagggtgtaaataagaaactg
agcaggatgagttcggacgaggtggccaggtacaaattggacgactcgttaggcggtcag
tctcagacgcagcatcagcgggcgcttaaacgtatttacggggacaaggcgcaagacatt
atcgatggtctgaagaggaacccctcgattgcggtgccagtggtgctgcggcgtcttaag
gccaaggaagaagaatggcgggaggcccagaaaggttttaacaaaatctggcgggaacag
aacgagaagtattaccttaagagtctagaccatcagggaatcaactttaagcagacggac
gtcaaggctctcaggtccaagagtttgttcaacgaaattgaaaccatttttgatgagcga
cacgagcaaaatgaagacggtgtggaacccatcgtaggaccacacatggtgttagtttac
aaggatcgtactatactagatgatgcgtcgaatttgctaatccatcatctgaaacgccag
accggcatacagaagggcgagaagaggcggataaagcatttacttcgtcagttccttccc
gatctgttcttccaccctcgtcaacaattgagtgacgacgaacgagaggatgacgaagaa
aaagaagactgtgatgatagttctgataatagcccgcgtggcgatagcaaaatcaaggtt
gaaaatatcagtcctggtaaatcaccaggtcgctgtgatggagacaatgtagacgttaaa
tcagaagatcagagagatgtcgatgttaaagtgcctttacacgctcgagtatctgatcct
gaggaatgttacactcttttcatggccaacaacaactggtacattttcttgagattgcac
gccattctttgtgaaaggttggcgaaaatctacgagcgggcggtgatattagtgtccgaa
gaagttaattcgaaaggatctaggaaggaaagcactgcggtggcactcagattgaagccc
aagccgcagatcgaggtggaggcgtactatccagcatttttggacatggtgaaaaacctc
cttgacggcaacatggaggccaacacttacgaagacacgctccgggaaatgttcgggatt
cacgcttacatcgcgttcactttagataaagtggtgtcttacgcggttagacagttgcaa
cactgtgtgacagaacgaacggccatcgcatgtacggacttgttcctcaaggaatacaag
cgtggtgcggctggaggattgtgtgcgacggcttacaaacgctcattcctcgaactgggg
taccagagggcggccgagaaggccgtccaggaggagaactgcttcaagatctacatttac
aagaaggactgtcgcatgaccatcgaactgttagacacggagccggaagaccaaagcaaa
aaggtcgaggacgcgaagaagtggagcgagtacaaggaggcttacacggacatcaccaac
accgattgcaaggccagatcgccggtttacctcaatcgtaacatacaggtcaagaaggag
acgtcggagagtccgccgaacagagaacgcggtcaacgcaaaaatgcgtccagcgattgc
aacgatcgttccaaagatgacaaacgcggctccagcaagacggacgagaacgactacagc
atattcgacgagctggagaggaagctgaatgagcgcgcgtcacctgaacgcaaccagacg
aaacatcctggttacgtggtgtccgacgacaccgagtgtaacttcaatgtgaacaactca
aaaatcgcgtttacatacaacaaagacagttacatctataaaatgagtgcctttagtaga
gctagaaagtcccatccatccatcaccaagcggaaagcggcccgtttccggagctggctc
aaggaatggaccgccgaacacgtgacagatagccaacacaaacactgtgtggattggttg
atgggccgttgcgagggcgtcgtaccgaacaagacccgcgtagtaaccgacaacgatctc
tcgcgcaccccctacgcaccgtacaacaggtaccgcgtgcgtctgagcagcgccgacggt
cacagcgactcgacatga
DBGET
integrated database retrieval system
