Aethina tumida (small hive beetle): 109599551
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Entry
109599551 CDS
T06105
Name
(RefSeq) enhancer of mRNA-decapping protein 4 homolog
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109599551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109599551
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109599551
mRNA degradation factors
5'-3' decay
Decapping complex
109599551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
DUF885
NifU_N
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
109599551
NCBI-ProteinID:
XP_019871119
LinkDB
All DBs
Position
4:complement(join(3048819..3048999,3049052..3049275,3049497..3049647,3049753..3050090,3050149..3051018,3051544..3051756,3051815..3052160,3052218..3052406,3052461..3052573,3052632..3052971,3053048..3053234,3053286..3053491,3053549..3053583))
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AA seq
1130 aa
AA seq
DB search
MSSPTPKSNQLIKYTGNETEYSAQIVGQNVTVICKPGVHTLGSSKVKLINKIDYNWEFRY
YHGHLIAAHINGKVFAYAMKGKDGGMIRVCNLETDVRALIKNLKDDVRDISFAVSKQEII
LGCVDSEGNVLIYQIHDQPSEIKYELLLHIYLGNINVTRSHINYRIIWCPYVSNFDEEDT
GEDPERMFVVLNGPKAEVYNVDIMNSKHGVGPFQTDDSYEGYIGIDHNDDLVDASFSTDG
TAIAIASVDGFVKFFQLYMGDEEKEKCLHQWKPHEGRPLSSIIFIDNVLEYSSECWKFMI
TGAHNNSEIKIWSCETWSCLQMITFKSDPTSPIPTLYFNMSIDYTSRYLVVSDINNRVLY
IIQLERIDNEQTVRVSTLSQFQLPAAFLSFHILDACSKKLPYSFEDSAEDIYSVGGGDDD
DDVETLIEANYLQMLVVQPKKFQECKVIYSPELLIYKTKCDIIGQDEAGDQNVPKLDDLQ
NSVSLLIQQQSGKNGQMNLMTPEDFRDPNELRPSSVRNSLTGDGQNSNEGTVDNLIDFKL
LQKDNFASGGSSPSREVQEILSLNNSTYSTQDFFDNLSKLSVSAQDAAEEDDDTITAPQK
PQEYNGVASTVSTNEVNDRAANEDLDVASLLTNNTSSSSTDMVWPKLPIVDNSEMVKEGE
IVIGERAEEAAAQPTTDDVNNSNLQSINFRISSLENTIREQSIQLQKLSSEMREREKESR
EWHLKELELLVSKQNLQLAKVAENVASVAASRKSDAGAQQEHRLALAVSEVVERRVGDRM
RETVAAEVTTRIAPQLLQMMDQYRKQIDVLFAQRMASADVALKDSISKAINNTTLAESLS
LSVAKIVAPSLEKCYRDIVYSSLVPSWEKVCSQMFQQINETFSQGTKEYTACVENYMDRQ
RRVQEKGKDMMAQMHNVSENMKSNADRLAATITAEFQKQFNSSFKNMQDRLTSNLRETVS
AEVKQAFKNHASVLEDSVINAVRSRAVTPSPHFDTQATLQQIQQYLTRGNYDEAFQLALG
AENLSFVIYACEKTDINTLFGDECLLKPSCLLALIQQLSMDLIHYTELKFSYIQAALLAL
STENSSTKQFIPKVIKDLLKQLHIFLNTSTSAKHIKEAKLLKMVAESFLK
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcctacaccgaaatccaatcagctgatcaaatacactgggaacgagacagaa
tactctgcacaaattgtaggtcaaaatgtgacagttatttgcaagccgggagtgcacact
ctgggcagctccaaagtcaagttgataaacaagatagattacaattgggagtttcgatac
taccatgggcatctaattgcagcccacattaatggcaaagtctttgcctatgcaatgaaa
ggaaaggatggaggaatgattcgagtttgtaatcttgagactgatgtaagagcgcttatt
aaaaacctaaaggatgatgttagggacatatcttttgctgtatcaaagcaggagattatt
ttaggctgtgtagattcagagggcaatgttctaatttaccaaatacatgatcaacctagt
gaaattaaatatgagctattactgcacatataccttggcaatataaatgtgacaagatca
cacataaactacaggataatttggtgtccttatgtttcaaactttgatgaggaggacaca
ggagaagatcctgagcgcatgtttgttgtattaaatggcccaaaggctgaagtttacaat
gttgacataatgaacagcaaacatggtgttggtccatttcaaacagatgattcctatgaa
ggctacattggaattgaccacaatgatgaccttgttgatgcttctttttccactgatgga
actgctattgctattgcctctgttgatggctttgttaaatttttccagttgtatatgggt
gatgaagagaaggagaagtgtttgcatcaatggaaacctcatgaaggtagacctttgtct
tctattatattcattgataatgttttagagtacagctcagagtgctggaagtttatgata
acaggagcccacaacaactcagagatcaaaatttggtcctgtgaaacttggtcatgcctt
cagatgatcaccttcaagtctgatccaacatccccaattccaaccttgtattttaacatg
tcaattgattacacaagtcgatatttggttgtttcagacataaacaatagggtgttgtac
atcatacaactggagaggatcgacaacgaacagacggtacgcgtgtccactctgtcccag
tttcagctgcccgccgccttcctcagtttccacatactcgacgcttgttccaagaagctg
ccctattcgttcgaggacagtgcggaggacatttactcggtaggcggtggcgacgacgac
gacgacgtggagaccctcatcgaggccaactatctccaaatgttggttgtgcagcctaaa
aagttccaagagtgcaaggtgatctattcaccggagcttttaatttacaaaaccaaatgt
gatatcatcggacaagacgaagccggcgatcaaaatgtaccgaaactagacgatctccag
aactcagtttcgttgctgatccaacagcaaagcggcaaaaatggtcagatgaatctgatg
acgccggaagatttccgggatcccaacgagttgagaccgtccagtgtgaggaactctttg
actggcgacggccagaactcgaacgagggcactgtcgataacctcatagattttaaattg
ctgcagaaggataattttgctagcggtggttcgagtcctagccgggaggtacaggagatc
ctgtcgctgaacaactcgacctattcgacccaagacttcttcgacaacctgtcgaagctg
tcggtgagtgcccaggatgcggcggaggaggacgacgacacgataactgcaccccaaaaa
ccccaggagtacaatggcgtggcgtcgaccgtgtcgacgaacgaggtcaacgacagagct
gccaacgaggacctggacgtcgcttcgttgttgaccaacaacacgtcctcgtcctcgacg
gacatggtgtggccgaagcttcctattgtagacaattctgaaatggtcaaggagggcgag
attgtcattggtgaacgggcggaggaggcggccgcccagccgaccaccgacgacgtcaac
aatagcaatcttcagtcgatcaacttcagaattagctcgttggagaacacgattcgcgaa
caaagcatccagctgcaaaagctgtcgtccgagatgcgagagagggagaaggaatccagg
gagtggcacctcaaggaactcgagctgttggtgtccaagcagaacctccagctggccaag
gtggcggagaacgtggccagcgtggcggcctcacgaaagtcggacgcaggtgcccaacag
gaacaccgacttgctttggctgtgtctgaggtggtggagcgtcgcgtcggcgaccgcatg
agggagaccgttgcggccgaagtcacgaccaggatagccccgcagctgttgcaaatgatg
gatcaatacaggaagcaaatcgatgttttgttcgcccagaggatggccagcgccgacgtg
gccctcaaggacagcatttcaaaagccatcaacaacacgaccctcgccgaatctctgagc
ttgtccgtggccaagatagtggcgcccagcctggagaagtgttacagggacatcgtgtac
tcatcactcgtgccttcgtgggaaaaggtgtgcagccaaatgttccagcagatcaacgaa
acgttctcgcagggcaccaaggagtacaccgcctgcgtggagaactacatggacaggcag
aggcgcgtccaggagaagggtaaagacatgatggcgcagatgcacaacgtctctgagaac
atgaagtctaacgctgaccggctcgcagccaccatcaccgccgagttccagaagcagttc
aactcgtcgtttaaaaacatgcaagatcgactgacctccaacctgagggagacggtgagt
gcggaagtgaagcaggcgttcaagaaccacgcgtcggttttggaggacagtgtgatcaac
gccgtgcggtccagggctgtcaccccgtcaccccacttcgacacacaagcgacgttgcag
caaattcaacagtatttaacccggggcaactacgacgaggcgttccaactggcacttggg
gctgaaaacctgtcatttgtgatctacgcttgcgaaaaaactgacattaatactcttttc
ggtgacgagtgcttgctgaagccgagttgtctattggctttgattcagcagctcagcatg
gacctcattcactacactgagctcaaattcagttatattcaagctgcgttgttggccctc
tcgactgaaaactccagcacaaagcagttcattccaaaagtgattaaagatctgctgaag
cagctgcacatatttttgaacaccagcacttccgccaaacacataaaggaggctaaactt
ttgaagatggtggctgaaagtttcttgaagtaa
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