KEGG   Aethina tumida (small hive beetle): 109599587
Entry
109599587         CDS       T06105                                 
Name
(RefSeq) collagen alpha-1(XV) chain isoform X1
  KO
K06823  collagen type XVIII alpha
Organism
atd  Aethina tumida (small hive beetle)
Brite
KEGG Orthology (KO) [BR:atd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atd04147]
    109599587
   00535 Proteoglycans [BR:atd00535]
    109599587
   00536 Glycosaminoglycan binding proteins [BR:atd00536]
    109599587
Exosome [BR:atd04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109599587
Proteoglycans [BR:atd00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   109599587
Glycosaminoglycan binding proteins [BR:atd00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109599587
SSDB
Motif
Pfam: Endostatin Collagen Collagen_trimer Laminin_G_3 DUF1554
Other DBs
NCBI-GeneID: 109599587
NCBI-ProteinID: XP_049818802
EnsemblRapid: ENSATDG00005010878
LinkDB
Position
2:join(27745351..27745361,27811267..27811385,27872481..27872844,27872902..27873082,27923624..27923695,27925478..27925522,27928125..27928319,27928370..27928447,27928504..27928815,27928878..27928907,27932334..27932637,27932697..27932983,27934066..27934173,27934250..27934261,27935067..27935135,27937670..27937922,27941763..27941831,27949551..27949750,27952826..27952948,27961514..27961528,27968970..27969270,27971572..27971815,27978374..27978434)
AA seq 1150 aa
MIRGLVFLILFYHWPYLCAVVGDDVDEDTYELPPSFALGANIEVSEYDLLDAVKIPFVDS
KTQYIDEDGHDGFPAFGFRAGSDVKIAHRQILPEKLSAEFSILISAKPRSRRGGFIFAVV
NPYDTVVQLGVKITPEGTGSFIISLFYTAATEIVSQTIANFTVNRFYGKWTRFAFKVTAE
NVTLYLNCNETETLAVKKDPAELVFDSASTLYIAQAGPTLGEPYEGALDQVKIYQDPKMA
AEQCKTDFQGFQSVHPDETDENQNVVQTDYDQNFKEGSGTDGLGVFPPPPPPPDGKACLC
GTENCCNYLFNDVQAAGRLRGEKGDRGPRGPPGESIRGPPGPPGPPGVPGPAAPEGVCTC
NITSILNSLGTSNLPFSPAHPGADGKTGPPGPAGRPGTPGEKGPMGPRGEKGERGEKGAQ
GPEGQQGKRGEDGKHGNPGPPGPPGPPGPPGPVEFENVDPSWKPRGPFKETVLGGSMVRP
GVPGTKGDPGKPGPLGPRGERGLQGQKGVKGDLGPKGERGDRGLPGETGAVGPKGEMGLP
GVDGIPGIHGKNGEKGDKGDPGKPGPPGAPGLSFATDESMGIVQAVQGPKGEAGEPGPPG
TNGRDGEPGIPGVPGSMGPSGLPGPKGEPGLDGAIGPVGPPGVKGEPGPPGAVIMPDGNE
QILTIKGDKGDMGRRGRRGKPGPSGPPGKPGPPGEVGLPGWMNGQKGRSGPTGYPGPKGE
KGEPGNYGMNKGEKGDRGQDGTPGRDGQPGPPGPPGPPQGRNGDDPVRFIPVPGPPGPPG
PPGPPGMPGLTITGPKGEPGGGHYGEPTYNLRPGGKGGLEELKALRELKDLKDHHTGRST
MSPPLAAPEAEALSAHIVPGAVTFQDRDAMTKMSSASPVGTLAYIIEEEALLVRVNSGWQ
YIALGSLLPVTTPAPPTTSSPQLRPPFEASNLINHVSKPTHVSNWYPKMLRMAALNEPYT
GDVHGVRGADYACYREARRAGLRGTFRAFLSSRVQNVDSIVRLADRKLPVSNLRGEVLFN
SWSEMFGGDGAPFPHPPRIYSFNGKNVLTDLSWPHKAVWHGALVSGERALDTSCDAWHAS
SRDKVGLAGSLKGPRLLEQSPYTCDKRLILLCIEATTELFVQRRRRDTDNGVDDPLLTEE
EYHNLLHSIH
NT seq 3453 nt   +upstreamnt  +downstreamnt
atgattcgtggattggtttttctaattttgttctatcattggccgtacttgtgtgctgtg
gttggcgatgacgtggacgaagacacgtacgagttgccgccctcatttgccttaggagct
aatattgaagtttccgaatatgacctgttggacgccgtcaaaatcccgttcgtcgactcg
aaaacccaatacatcgacgaggacggtcacgacggcttcccggcgttcggattcagagcc
ggatcggacgtaaagatcgcccaccggcaaatcctgccggagaaactgtccgccgaattc
tcgatcctgatcagcgccaaacctcgaagccgtcgcggcggcttcatattcgccgtggtc
aacccctacgacaccgttgtgcaactgggggtcaagatcacgccggagggtaccggctcc
ttcatcatctccctgttctacacggccgccacagagatcgtatcccaaaccatcgcaaat
ttcaccgttaacaggttttacggtaaatggacaaggttcgcgtttaaggtgaccgccgaa
aacgtgacgttgtatttgaactgcaacgagacggaaacgttggcggtgaaaaaggatccg
gcggagttagtcttcgattccgcttcgacgctgtacatagcccaggcgggtccgacactc
ggcgaaccctacgagggcgccttggatcaagtgaaaatttatcaggatcctaagatggca
gcggagcaatgcaaaacggatttccagggttttcaatccgttcatccggatgaaactgat
gaaaatcaaaacgttgttcaaacggactacgatcagaatttcaaggagggtagcggaacc
gatggcttaggggtatttccgccaccgccgccgcctccggatggtaaggcttgcctatgt
ggcacagagaattgttgcaattatctttttaatgatgtgcaagctgccggacgtctaaga
ggagaaaaaggagacaggggtcctagaggcccacctggagaatcaatcagaggaccgccg
gggccacccggacctcccggcgtccctggaccagccgcccctgagggcgtctgcacatgc
aacataacatccatcctaaattccctgggaacatccaacctgcccttctcaccggcccat
ccgggggcggacggcaagactggacctccgggtcctgccggaagacccggaacgcccgga
gaaaagggacccatgggtcctaggggcgagaagggagaacgcggcgaaaagggggcgcag
ggaccggaaggacaacagggcaaacggggcgaggacggaaaacacggtaatcccggacca
cccggacctccgggacctccaggtcctccgggtccagtcgagtttgaaaacgtggacccc
agctggaagcctcgcggacctttcaaggaaaccgtgttgggcggctcgatggtgcgaccg
ggcgtgcccggaaccaaaggcgacccaggaaaaccgggacccttgggtccaaggggcgaa
cgcggcttgcagggtcagaagggcgtcaagggcgacttgggaccgaaaggcgaacggggc
gatcgcggcctgcccggcgagaccggagcggtcgggcccaagggcgagatggggctgccc
ggagtggacggcatacccggcatacacggcaagaacggcgagaagggagacaaaggcgat
cccggcaagcccggtcctccgggcgcaccaggactgtcgtttgcgacggacgaatccatg
ggcattgttcaggcggtgcaagggccgaagggcgaagctggggaaccgggacctcctgga
acgaacggcagagatggagaaccgggtattcccggcgtacctggttcgatggggccgagc
ggtttgcctggacccaaaggagaacctggtttggacggagcgattggtcccgttggaccg
ccgggggttaagggagagcctggaccacctggtgcagtcattatgcccgatggaaacgaa
caaatactgacgataaagggagacaaaggtgatatgggaaggcgtggacgcagaggaaaa
cctggtccatctggaccaccaggtaaaccgggacctcctggagaagttggacttcctggt
tggatgaatggacaaaagggtcggtctggacctactggatatccgggacccaaaggcgag
aagggcgaacctggcaattatggaatgaacaaaggggagaagggcgaccggggccaagac
ggaacgccgggccgcgacggccagcccggtccgccgggtcctcctggaccgccgcagggc
cgcaacggcgacgatcccgtccgattcatacctgtgccaggaccacccggaccacccgga
ccccccggaccgccgggcatgcccggactcacgatcacggggcctaagggcgagccgggc
ggcggacactacggcgagcccacctacaatctcagacccggaggaaaaggcggattagag
gagctaaaagcattgcgagaacttaaagacctcaaggatcatcacacaggacgctcgact
atgagcccgcctttggcggcgcccgaagcggaagcgctgagcgcccacatcgtccccggc
gccgtcacgttccaggaccgggacgccatgaccaagatgtcgtcggctagtccggtggga
acgctggcctacattatcgaggaagaagcgctgctcgtacgagtcaacagcggatggcaa
tacatcgcgctgggttcactgttacctgttacgactccggcaccgccgactacaagcagt
cctcaactacggccacctttcgaagccagcaatcttatcaatcacgtatcgaagccgaca
cacgtctcaaattggtacccaaaaatgttgcgaatggcggcgcttaacgagccctacacc
ggcgacgtgcacggcgtcaggggcgccgactacgcctgctacagggaggcgcgccgtgcc
ggcctgagaggcaccttccgcgccttcctgtcgtcgcgcgtccaaaacgtcgactcgatc
gtgcggctggccgaccgtaagctgcccgtctccaatctgcggggcgaggtgctcttcaac
tcgtggtcggagatgtttggcggcgacggggcgccgttcccgcatccgccgcgcatctac
tccttcaacggcaagaacgtactcacagatctgtcctggccgcacaaggccgtgtggcac
ggagcgttggtaagcggcgaacgagccttggacacgtcctgcgacgcgtggcacgcctcc
tccagggacaaggtcggactggccggctccctcaagggcccccggctgctcgaacagtcc
ccctacacttgcgacaagcggctcatcctgctttgtattgaggccaccaccgagctgttc
gtacaaaggaggcgcagggacacggacaacggggttgacgatccactgctgaccgaggaa
gagtaccacaaccttcttcattccattcattaa

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