KEGG   Aethina tumida (small hive beetle): 109599744
Entry
109599744         CDS       T06105                                 
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
atd  Aethina tumida (small hive beetle)
Pathway
atd04382  Cornified envelope formation
atd04512  ECM-receptor interaction
atd04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:atd00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109599744
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109599744
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    109599744
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atd04147]
    109599744
   00536 Glycosaminoglycan binding proteins [BR:atd00536]
    109599744
Exosome [BR:atd04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   109599744
Glycosaminoglycan binding proteins [BR:atd00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109599744
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 109599744
NCBI-ProteinID: XP_049822893
LinkDB
Position
4:join(17994288..17994316,18001517..18001559,18005919..18006220,18006273..18006635,18006691..18006838,18006895..18007137,18007191..18007412,18007465..18007764,18007820..18008287,18008359..18008742,18008797..18009271,18009328..18010827,18010917..18012157,18012217..18012474)
AA seq 1991 aa
MVDMTDHGLGFVVILLGVWTLTSGQFVSNHRAVNRTGVYRRLDDYRYPPSSYYRSNENPD
RQDAYRTQSREYYDTRAGGARNDYDSRFQERYGGGGDGHVVETSASVSGGASVTTSPDEY
GNEDRYSASGSYSAGSSVSLNGGPSDGSSSGGRSYSSSYSSGGQAGGSSSGGHYSSSSGQ
YGGGGSYGSSGQYGSSRQYGSSEQYGSSGGSSGQASGSSSHYSSSSSSGGASRGGYSQSG
YGASGGSYGGYGTTQIKNYHRYPSYDIFDAPGSALGPRNGSERCIPKCFAEKGDRGFPGL
PGLPGEKGQRGYPGEEGLQGSKGEKGETGFPGPRGPKGDRGKSGIPGFPGIHGVPGIQGP
PGPPGIPGVDGCNGTDGLPGAEGRQGESGPRGFPGAPGPKGVKGEAAHCEITLKGQKGEP
GRDGVRGPAGNPGPIGPQGIPGDMGLPGDRGLRGPPGPKGSKGTPGVGFYGEKGDKGDLG
PPGPPGEFIGLLINNTVITGPRGDRGEPGEKGNPGEIGPKGEPGLDGDVGLPGAIGMKGE
KGLPGVAGPRGRDGYSGPPGPPGQKGDRGMEGLPGLSGRPGQKGEPGRDGPPGFVGLTGP
PGQPGGGKGFPGPPGPPGPRGHPGLRGPKGMDGFPGEPGPVGPVGPPGGPGLPGINGPEG
LPGEKGQKGESGAIGFPGQEGPRGYPGPIGPQGPRGFPGDKGFSIQGPKGDDGEPGRDGA
KGDKGQKGFAGARGAPGDTIGGIPGSPGSRGSPGEKGNAGRPGYPGTPGRPGEKGDIGGR
CIDCRPGGPGPKGDRGLDGRDGLPGLRGPPGPPGYPGEPGNDGVPGRDGPAGEPGIPGKD
GLPGMPGLPGESVIVPDSLMKAEKGEKGQRGSKGADGPPGFIGDKGDRGFPGVPGLPGEK
GDRGYDGDRGLDGRPGQPGLPGIKGEKGEGFKGEPGEWGDKGDKGMPGRDGRPGEKGDAG
QCPENITAKLKGDKGWPGLKGEPGRPGFDGERGEKGDRGNVGLPGAPGHDGPPGPVGRRG
LPGPRGDKGERGPMGFPGEPGRDGERGLAGLPGSKGDKGEAGIPAIGPPGPPGPMGYKGE
KGLPGYPGKTGAPGMDGLIGLMGEKGDIGIPGLNGLPGPAGQKGEPGPRGPPGLNGPPGR
DGQPGEPGVPGRKGDAGNPGPVGFPGPKGDSGIPGAEGPKGFKGSAGRPGPPGPPGMDGM
PGAIGDKGDRGYPGPPGPQGLFGMPGDRGFPGPKGNTGDIGPPGLPGPIGVPGLKGDAGF
PGLPGRKGEPGSASEKGQKGEPGLPGLRGAAGLQGSPGYPGPKGDAGFPGRSIVGQPGDK
GDQGVPGIDGLPGTPGLKGDMGLVGYPGPKGDRGFPGDTGQPGMDGHNGLPGEKGDRGFP
GEPGYMGQKGDKGQPGLAGFDGPKGERGPQGLPGNPGFPGIKGEQGDRGTPGPSLQIKGE
KGEPGPSGLIGRTGEKGDRGFQGAIGLQGEKGDIGYPGQKGDTGPYGLAGAKGERGNPGF
PGIPGLTVKGEKGLRGLDGKHGREGIPGRPGEKGEMGLPGLPGRMGPPGPIGPVGRPGEK
GDRGFEGPPGPRGPTGPQGRPGLDGLPGRDGEKGERGPPGLLGAPGEKGEPGMTGLQGPR
GVPGEKGDRGYDGRPGAPGAIGIAGEKGDQGLIGLVGAIGVAGLPGQKGERGQPGFPGAP
GEKGNAGPPGMPGARGLQGIAGAIGLQGAEGEKGERGFQGAIGLTGEKGEKGDRGLDGLP
GVDGLVGEVGPKGEPGLPCTHAPDYLTGTLLVKHSQSNIIPQCEAGHIKLWEGYSLLYVE
GNEKAHTQDLGVAGSCVRRFSTMPFVACDINNVCNYASRNDKSYWLSTNAPIPMMPVAET
EIQEYISRCVVCEAPANVIAVHSQSTIQPSCPSGWSSLWVGFSFLMHTAAGAEGGGQALS
SPGSCLKDFRVTPFIECNGGQGTCHYFSNALSFWLATIEDHKQFIKPERETLKANNVRNR
VSTCRVCIKNT
NT seq 5976 nt   +upstreamnt  +downstreamnt
atggtcgatatgaccgaccatggacttgggttcgtggtgatattattaggagtatggacc
ctaacaagcgggcaattcgttagtaaccatcgtgcagtgaataggactggagtatataga
agactagacgactatcggtaccccccaagttcgtactacagaagtaacgaaaatccggac
agacaggatgcctaccgaacacagtcccgggaatactacgacaccagagctggtggtgcg
cgtaacgactatgactctaggttccaggaaagatacggcggtggcggtgacggacatgtc
gttgaaacgtcggccagtgtaagcggaggagccagcgtcactacatccccagacgaatac
ggaaacgaagacaggtactccgccagcggtagttactcagctggcagcagtgtctcatta
aacggtggtccaagcgatggttcgtcttccggcggcagaagttactcgtcgagttattcg
agcggcggtcaggccggcggcagcagtagcggcggacattatagcagcagtagcggccaa
tatggaggcggcggaagctatggaagcagcggacaatacggaagcagcagacagtacgga
agcagcgaacaatatggaagtagtggtggcagtagtggacaagcaagcggaagcagcagt
cattattcaagcagttcttcctctggtggtgccagtagaggcggttactcccaatctgga
tacggtgcatctggcggatcatatggaggatatggaactactcaaatcaaaaattaccac
agataccccagctacgacatatttgacgcccccggcagcgccttaggtcccagaaatggc
agtgaaaggtgcatccctaaatgtttcgcagaaaagggagatagaggtttccccggcttg
ccaggcttgcccggagaaaaaggtcaaagaggttatcccggagaggaaggtcttcaggga
tccaaaggtgaaaaaggtgaaaccggttttccaggacctcgtggacccaaaggagataga
ggcaaatcaggaattcccggttttcctggaattcacggagttcccggtatccaaggacca
ccgggacctccaggtattcctggtgttgacggatgtaatggaactgatggtttgcccgga
gccgaaggtagacaaggtgaatctggacctcgaggtttcccaggtgctccaggtccaaaa
ggtgttaaaggagaagcggctcattgcgagataacattgaaaggtcaaaagggagaacct
ggaagagatggtgttagaggcccagccggtaatcccggtccaatcggtccccaaggtata
cccggagatatgggtttacctggagatagaggtcttagaggtccaccaggtcctaaaggt
tcaaaaggtacccctggtgttggtttctatggtgagaaaggagacaagggtgatttagga
ccacctggaccacctggagaattcattggtttgttaataaacaatactgttataactggt
ccaagaggtgatcgaggtgaaccaggagagaagggcaatccgggtgaaataggtccaaag
ggagaaccaggtttagatggagacgttggtttaccaggagcgattggtatgaaaggagaa
aaaggtttacctggagtcgctggaccaagaggtcgcgatggttattctggaccaccaggt
cctccaggtcaaaagggagacagaggaatggaaggattgccaggcttatctggacgtcca
ggacaaaaaggtgaaccgggtagagatggaccaccaggttttgtaggtttgaccggtcca
cccggtcaaccaggtggtggaaaaggattccctggccctccaggacctccagggcccaga
ggtcatccaggtctcagaggacctaaaggtatggacggttttcccggagaaccaggacct
gttggacccgttggtccaccaggagggcctggattgccaggaataaatggaccagaaggt
ttgcccggtgaaaagggacagaaaggagagagtggagctattggttttcctggacaagaa
ggtcctcgtgggtatccaggtccaataggaccacagggacctagaggcttccctggcgac
aaaggattttctattcagggaccaaaaggtgatgacggtgaaccaggtagagatggtgcc
aaaggagataaaggacaaaaaggtttcgctggtgctagaggtgctcccggtgatacaatt
ggtggaattcccggttcaccaggaagtcgaggatcgccaggtgaaaaaggtaacgcagga
agacccggttatcctggaacaccaggaagaccaggagaaaaaggtgacatcggtggaaga
tgtattgactgtaggcctggaggacccggtccaaaaggagacagaggtttggacggaaga
gatggacttcctgggctcaggggaccaccgggaccacctggttaccctggtgaacctggt
aatgatggagtacccggtagagatggtcctgcgggagaacctggtataccaggaaaagat
ggtttaccaggaatgcctggtttgccaggagaatctgttatagttccagatagtctaatg
aaggctgaaaagggagaaaaaggtcaaagaggatctaaaggagctgatggaccaccagga
tttattggtgacaaaggtgacagaggattccctggtgtaccaggtttgccaggtgaaaag
ggtgaccgcggatatgatggagatcgtggattagatggaagaccaggtcaacctggtctt
cctggtattaagggagagaaaggggagggctttaaaggagaacctggtgaatggggtgac
aaaggtgacaaaggtatgccaggcagagatggaagaccaggtgaaaaaggtgacgctggg
caatgtcctgaaaacattactgctaaattaaaaggtgacaaaggttggccaggacttaaa
ggagagcctggaagaccaggatttgatggagaaagaggtgaaaagggtgatagaggtaac
gttggtcttcctggagcaccaggtcatgatggtccaccaggtccagtaggtagacgtggt
ttacctggaccgagaggtgataaaggagaacgaggtcctatgggattcccaggggaacct
ggaagagatggtgaaaggggtctcgctggccttcctggctctaaaggagataagggagaa
gctggaataccagcaattggccctccaggaccacctggaccaatgggatataaaggagaa
aaaggattgccaggatatcctggtaaaactggggcacctggtatggatggtcttattgga
ttgatgggagaaaaaggagatattggtattcctggattaaatggtttacctggaccagct
ggtcaaaagggagagcctggcccaaggggaccccctggattaaatggaccaccaggaaga
gatggtcagcctggtgaaccaggtgtacccggacgtaaaggagatgcgggtaatccaggt
cccgttggcttcccaggaccgaaaggtgatagtggtatcccaggagccgaggggcccaaa
ggtttcaaaggatcagctggaaggccaggtcctccaggaccacctggaatggatggcatg
cccggcgcaataggagataaaggtgacagaggttatccaggaccaccaggacctcaagga
ttatttggaatgccaggtgatagaggttttccgggacccaaaggtaacacaggtgatatt
ggacctccaggattacctggacctattggtgtccctggattaaagggtgatgctggcttc
cctggattaccaggaagaaaaggtgaaccaggatcggcatcagaaaaaggacaaaaggga
gaacctggacttccaggattaaggggtgccgctggtttacaaggatcaccaggttatcct
ggtccaaaaggagatgccggatttccaggaagaagtattgtaggacaaccaggtgataaa
ggagatcaaggtgtacctggaatagatggactaccaggtacccctggacttaaaggagat
atgggtcttgttggatacccaggtcctaagggagatcgaggattcccaggagatacagga
caacctggtatggacggtcataatggactacctggagaaaaaggtgatcgaggattccct
ggtgaacctggatatatgggacaaaaaggagataaaggacaacctggactggccggtttc
gacggacctaagggagagagaggtcctcagggattgccaggaaatcctgggttccctgga
ataaagggagaacaaggagatagaggtactccaggaccatcactgcaaattaagggtgaa
aaaggagaaccaggtccttccggactcattggaagaacaggagaaaagggagatagaggt
ttccagggagcaattggattgcaaggtgaaaaaggagacattggatatccgggacaaaag
ggtgatactggtccatacggtttagcaggagctaaaggtgaacgtggtaatcctggtttc
cctggtatccccggtttaactgttaaaggagaaaaaggtctccgtggtctagatggcaaa
catggtagggagggtatcccgggacgtccaggagagaagggtgaaatgggacttcctgga
ttacctggtagaatgggtcctcctggtcctattggtccagtcggcaggccaggtgagaaa
ggtgaccgcggttttgaaggaccaccaggtcctagaggacctaccggtcctcaaggacga
ccgggtcttgacggacttcctggcagagacggagaaaaaggagaaagaggacctcccggt
ctacttggtgcacctggtgaaaagggagaacctggaatgactggcttgcaaggcccacgt
ggtgttcctggcgaaaagggtgacagaggatatgatggaaggccgggagctcctggtgct
attggtattgccggtgaaaagggagatcagggattgattggtttggttggtgctattgga
gtagcgggtcttccgggacaaaagggagaacgtggacaaccaggtttcccaggtgctcca
ggagaaaaaggaaatgctggaccacctggtatgcctggtgcacgcggtttgcaaggtatt
gctggtgccattggtctgcaaggagcagaaggagaaaagggagaaagaggtttccaaggt
gctattggtctgactggcgaaaaaggagaaaaaggtgacagaggtttggatggattgcct
ggagtagatggattagttggagaagttggtccaaagggtgaacctggactgccttgcact
cacgctccggattacttaactggaacacttttggtcaagcacagtcaatcaaatattata
cctcagtgtgaagcaggccatattaaactttgggaaggttattctcttttatatgtcgaa
ggaaacgagaaagctcacactcaagatcttggtgttgctggttcatgtgtcaggcgattc
tccactatgccatttgtggcttgcgatattaacaacgtttgcaattatgcgagcagaaat
gacaaatcgtattggttatctacaaatgctccaattccaatgatgcctgttgccgagacg
gaaattcaagaatacatttcacgttgtgtggtttgcgaagcacctgccaatgtaattgct
gtccacagtcagtctacaatacaacccagttgcccaagtggatggtcttcattatgggtt
ggcttcagtttccttatgcacactgctgctggagctgaaggtggcggtcaggctttgtca
agtcccggatcttgtttgaaggacttcagggtaactccattcatcgaatgtaacggaggg
cagggtacttgtcactatttctcaaacgccctcagtttctggttggctacaatcgaggac
cacaagcaattcatcaaacctgaaagagaaacccttaaagccaacaatgtacgcaaccgt
gtcagcacatgccgagtttgtatcaagaatacgtaa

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