Aethina tumida (small hive beetle): 109600477
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Entry
109600477 CDS
T06105
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109600477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atd04131
]
109600477
Membrane trafficking [BR:
atd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109600477
Protein recycling
Other Rab GTPase associated proteins
109600477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
Motif
Other DBs
NCBI-GeneID:
109600477
NCBI-ProteinID:
XP_019872194
LinkDB
All DBs
Position
5:join(25518707..25518839,25519194..25519376,25519431..25519746,25519801..25520215,25520270..25520512,25521264..25522028)
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AA seq
684 aa
AA seq
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MPVLTLQRSYKYIMYATKQPSLRINQDDLKCKNGCGYFGNADWGGYCSKCYRNHMEQERQ
RKSRSQPEPSKSQMTGFGKFEEKKRQQTDKKNKYLPVFRKTSNVKDSERSFDLRQANPDA
DRLKAEFLAHFGKYGEHVRADFFKCAQTFIAKMMAEINVRPIDELAEIAQKYYNVYSIRV
NSHEQYHNVPTEARDELLDFFEKNCMISLYTWFFCPTSTNDEDKDLIIQDRIRKLSWVNA
HHLDCCISETSLEVRELVYTAINDLLGMDSMKAPQEKLACVVKCCRSVVEVLQHCQGGPV
SADEFLPALIFVVLKANPARLKSNILYVTRFCNDSRLMQGEAGYYFTNLCCAVSFIENLT
AVSLNMPEQEFQAYMSGEVTSVSAWESALVACEGMHQLCEHLALLGGLSERTATVRRDAA
QLREDMVQLKEEINGKVNAILERTPLIIKPRKTPIPFDPKSIQRKQNSQIRSETEATPQN
FYLQNLQLGTTLDNPKTKLQLDITPCIDVSDQQSKIPTSTSREYLSPSVDNLSLDVTPDD
NSYLGLSKINYDIDFSDLSADNSIAEELTPEKRTNYTPDPFSPLGTGCNIAQSPLIPTAA
NDVRTKPKDDFVLPFLDESKKVDDKNGETLLDKKTETPSTNLPSPIKPTTSQYTGFSTQG
WQIPSIPCDTGESSKLSRNKSEAK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtactaacgttacagcgatcgtacaagtacatcatgtacgcgaccaagcaaccc
tctctgaggatcaaccaggatgacctcaaatgcaagaacggttgcgggtacttcggaaac
gccgattggggaggttactgttcgaaatgttatcgaaatcatatggaacaggaaagacaa
agaaagtcgcgttcccagcccgagccgtccaagtcccagatgacgggcttcggtaaattc
gaggagaaaaaacgacagcagaccgacaagaagaacaaatatttgcccgtgttccgcaag
acatcgaacgtcaaagattccgaaagaagcttcgacctccgacaggcgaatcccgacgcc
gaccgtctgaaagccgagttcctcgcgcacttcggcaagtacggcgaacatgtccgtgcc
gatttcttcaagtgcgcccaaacgttcatcgccaaaatgatggccgaaatcaacgtgaga
cccatcgacgaactggccgagatagcacagaaatactacaacgtttacagcatcagggtg
aacagccacgaacaataccacaacgtgcccaccgaggcgcgagatgaactgttggacttc
ttcgagaaaaactgcatgatatcactctacacatggttcttctgtcccacgtccaccaac
gacgaggacaaggacctgatcatccaagaccgcatcaggaagctgtcgtgggtgaacgcc
catcatttggactgttgcattagcgaaacaagcctggaggttcgcgagctggtctacacg
gccatcaacgacttgctcggcatggactccatgaaggcgccgcaggagaagctggcctgc
gtcgtcaagtgttgcaggtcggtggtcgaagtcttacagcattgccagggcggtccggtc
agtgctgacgagtttttgccggcgttaattttcgtcgtgctgaaggccaatccggccagg
ttgaagagcaacattctgtacgtcaccaggttttgcaacgactcgcgtctgatgcaaggg
gaggccggctactacttcaccaacttgtgttgtgccgtgtccttcatcgaaaatttgacg
gcggtgtccttaaatatgccggagcaggagttccaggcatacatgtctggtgaagttacg
tcggtcagtgcttgggaatcagctttggtagcttgcgagggcatgcaccagctttgcgaa
catctggctcttttgggtgggctctcagagagaacagcgactgttcgcagagatgccgca
caattgagggaagatatggtccaattaaaggaagaaataaacggaaaagtaaatgccatc
ttagaacgaacaccattgataataaaacccagaaaaacccccataccctttgatccaaaa
tcaattcaacgaaaacaaaatagtcaaattcgcagcgaaactgaggcaactccacaaaat
ttttacctacaaaacctacagctgggaaccaccttagacaatcccaagaccaagctccaa
ttggacatcacgccttgcattgacgtgtccgaccaacagtcgaaaatacccacgtcaaca
tcaagggaatacctgtcaccatccgtcgacaacctgagcttggacgtcacgcccgacgat
aacagctatttgggcctgtcaaaaataaattacgacatagatttctccgatttgagtgcc
gacaacagcatcgccgaggaattgacgccggagaagcgtaccaactacacaccagaccct
ttcagtcccttgggtacgggttgtaacatagctcaaagtccattaattccaaccgcagct
aacgacgtccgcaccaaacccaaggacgactttgttttgccatttttggatgaaagtaaa
aaggtggatgacaaaaatggtgaaactctgttggataagaagacggaaaccccatcaacg
aatttgcccagcccaataaaaccgactacttctcagtataccgggttttccacgcaaggc
tggcagattccgagtataccgtgtgacacgggagaaagttcaaaattgtcgagaaacaaa
tctgaagccaaataa
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