KEGG   Aethina tumida (small hive beetle): 109601020
Entry
109601020         CDS       T06105                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like isoform X1
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
atd  Aethina tumida (small hive beetle)
Pathway
atd03020  RNA polymerase
atd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109601020
  09124 Replication and repair
   03420 Nucleotide excision repair
    109601020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atd03021]
    109601020
   03400 DNA repair and recombination proteins [BR:atd03400]
    109601020
Transcription machinery [BR:atd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     109601020
DNA repair and recombination proteins [BR:atd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109601020
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_recom DZR DUF3716 Ogr_Delta SR1P
Other DBs
NCBI-GeneID: 109601020
NCBI-ProteinID: XP_019872781
LinkDB
Position
2:19264284..19264679
AA seq 131 aa
MASKLPPKKSQSSGPPFVGIRFCQECNNMLYPKEDKAKKILLYACRNCNYKQRADSNCIF
VNRIMHEINELSHIVPDVISDPTMPKADNRPCPKCTNREAVFFQAQTRRAEEEMRLYYVC
TNALCVHRWTE
NT seq 396 nt   +upstreamnt  +downstreamnt
atggcctcaaaactgccgcccaagaagtcgcagagcagtgggcccccattcgtaggcatc
aggttttgtcaagaatgcaacaacatgctgtacccgaaagaggacaaggcgaagaaaata
ctgttgtacgcatgcaggaattgcaattacaaacaacgagccgattccaactgcatcttt
gtcaacagaattatgcacgaaattaacgaattgtctcacattgtgccggacgtcatctcc
gatccgaccatgccgaaggctgacaatcgtccgtgcccaaaatgtaccaacagggaagct
gtgttctttcaagcacagaccagacgagctgaggaagaaatgaggctctattacgtatgc
acaaatgcactatgtgttcacaggtggactgaataa

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