Aethina tumida (small hive beetle): 109601305
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Entry
109601305 CDS
T06105
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03030
DNA replication
atd03410
Base excision repair
atd03420
Nucleotide excision repair
atd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109601305
03410 Base excision repair
109601305
03420 Nucleotide excision repair
109601305
03430 Mismatch repair
109601305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atd03032
]
109601305
03400 DNA repair and recombination proteins [BR:
atd03400
]
109601305
DNA replication proteins [BR:
atd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109601305
DNA repair and recombination proteins [BR:
atd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109601305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_30
RCF1-5-like_lid
Rad17
RuvB_N
AAA_18
AAA_22
AAA_19
AAA_14
PTCB-BRCT
AAA_17
nSTAND3
AAA_5
NPHP3_N
AAA_16
AAA_assoc_2
AAA_28
SKI
AAA_33
BRCT_2
TsaE
Motif
Other DBs
NCBI-GeneID:
109601305
NCBI-ProteinID:
XP_049822462
LinkDB
All DBs
Position
4:complement(join(7056199..7056318,7056371..7056523,7056575..7056773,7056829..7057086,7057145..7057721,7057778..7058515,7058572..7058695,7058854..7059017,7059075..7059666,7059717..7059725))
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AA seq
977 aa
AA seq
DB search
MSRDIRSFFNAMSKKTGTKQEVKKPPPKIVDSDEEIIEDTPKKQKKTKKANIINSDSEEE
SNKPSKSKPKKESPKLKQVNVSDIFKNETIKQSKVEPIPKKEKETKEKASKKRKKSPTEL
GVHEDEDFEKTLMELDDDILIENADILDQSIQETIAKESKQGSSKENSPNKKEATNEKRV
TKANKSPVKKETEKRKLLKDEEVETPKKKRKLNESLNSSYSTMSPQEAHENRRMMYNKYL
NRGDPKNHGNKTYPEGTPTCLKDLTFLRTGVLDSLLGDEFQELVTKHGGRVVHAVSKKVN
YVVVGDEPGPAKLAKAESYGIPNINEDEFLDMILTKSGKSAHYVKQNSESDSAIGTSQSE
EFMEFDEVISSPKKPANSPKKDFKEVSSPKKQPAPSTSPKKSPVATTTTKTITTTTTTTK
QKSEQPDENLPWTEKYRPKDLKQVIGQQSTDSVLSKLYNWLKNWHSNRQLKTTGKVQGAS
ASKCALLSGPPGVGKTTMSSLVAKSLGFDVVEFNASDTRSQRLLKEEVSELVKCKTLAGF
MEGQKQTNMKRVLLMDEVDGMAGNEDRGGIQGLIQIIKDSSVPIICMCNDRYNQKIKSLA
TYCFDLRVTPPKPEQIKGYLKSICFREGLNVSYETIGNIVRNTDGDLRQALNYLSLWSVQ
NNEITGAVAKGEDRLIKDTVLGPWEVVQRVFKQEKGTSIAERSRLFFYDYSINPLFVQEN
YLNVVPFHQLKGKISENKETLLRVSAASDAISYGALVEQKIRSTNNWSLLDSQAMYSSVL
PGYYMHGTMRQPQFPGWLGKNSKRTKLSRMVTEIHIHSKPKTSCSKMAILMDYVNPLRER
IMSFLDKEHIQDAVDFLQLYHLSKEDYDNMMEIMCLSTTRYPQISAKTKGAFTRLYKKTN
PIVTRKLKKIKDDNEEGEEDEEDEESDDDDITKNAAIKVVKKDEASASTSKGKGKGKAKE
GAKTGTKTTTGGRGKKK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgagacatcagatcttttttcaatgccatgtctaaaaagacaggtacaaagcaa
gaagttaaaaagcctcctccaaaaatcgtcgattcagacgaagaaataattgaggacacc
cctaaaaaacaaaagaaaactaaaaaggctaacataattaactctgattcagaggaagag
tccaataagccatctaaatcaaaaccaaagaaagaatcccctaaattaaaacaagttaat
gtctcagacatttttaaaaatgaaacaataaagcagagcaaagttgaaccaattcctaaa
aaggagaaagaaacaaaagaaaaggcttctaagaaaaggaaaaaatctccaactgaatta
ggtgtgcatgaggatgaagactttgaaaaaactttgatggaattggatgatgatatttta
atagaaaacgccgatattttggatcagagcatccaagaaactatagcaaaggaaagcaaa
caaggaagctctaaagaaaactcaccaaacaaaaaggaagcaacaaatgaaaagagagtc
acaaaagcaaataaatctccagttaaaaaggaaactgaaaaaagaaaattattaaaagat
gaggaagttgagactccaaagaaaaaaaggaagctgaatgaatcactcaattcatcttat
tccacaatgagtccacaagaagcccatgaaaataggaggatgatgtataataaatactta
aaccgaggtgatcccaagaatcatggaaacaaaacttacccagagggaactccaacttgt
ttaaaagacttaacattcttgcgcactggagtcttggattctttactgggggatgagttt
caagaactggtcacaaaacacggtggaagagtcgtccacgcagtctctaaaaaagttaat
tatgtggttgtgggtgacgaacctggtccggcgaaactggccaaggctgagtcctatggc
attcccaacatcaatgaggatgagtttttggacatgatcctgactaaatccggaaaatct
gcccactatgtcaaacaaaattcggaaagtgattccgcaattggtaccagccaatctgag
gagttcatggagtttgatgaagtcatcagcagccctaaaaagccagcaaactccccgaaa
aaagactttaaagaagtcagcagccctaaaaaacaaccagctccatcaacttctccgaaa
aagtcgccagttgcaacaacaacaacaaaaacaataacaacaacaacaacaacaactaaa
cagaagtctgaacaaccagacgaaaaccttccgtggacggaaaagtatcgtcccaaggat
ttgaagcaagttatcggccaacaatcaaccgacagcgtcttaagcaaactgtataactgg
ttgaagaactggcacagcaacagacaattgaaaacgacgggaaaagtgcaaggcgcctcg
gcgagtaaatgcgccttgctgagcggaccacctggcgtcggaaaaaccaccatgtccagc
ttagtggccaagtctttgggcttcgacgtcgtcgagttcaacgcctccgacaccagaagc
cagaggttgctcaaggaggaggtgtccgagttggtcaagtgtaaaactcttgccggattt
atggaaggtcagaagcaaaccaacatgaaacgcgtcctgctaatggacgaggtggacgga
atggccggcaacgaggatcgcggtggtattcagggactgatccaaataataaaggacagc
agcgtccccattatttgcatgtgtaacgaccggtacaaccagaaaatcaaatcgttggcc
acgtactgctttgatttacgcgtaactccgccaaagcccgagcaaatcaagggctattta
aagagcatttgcttcagagaaggcctgaacgtttcctatgaaacaatcgggaacattgtg
aggaacactgacggcgatttgaggcaggccttgaattatctgtcactgtggagcgttcag
aacaacgagattactggagcggtggccaaaggagaggacagactgatcaaagatacggtt
ttggggccttgggaggttgtgcaaagggtgttcaaacaggaaaaaggtacatcaattgcc
gaaaggtcccgactattcttctacgattacagcatcaatcccttgtttgtccaggaaaat
tatttgaatgtcgttcctttccatcaactaaaagggaaaataagtgaaaacaaagagact
ctattgagagtgtcagcagcaagtgacgcaataagttatggagcattagtagaacagaaa
atcaggtccacaaacaactggtcacttctggattctcaggccatgtattcgtcggtactt
cccggttattacatgcacggcactatgagacaaccccagttcccgggatggcttggcaag
aattcgaagaggacgaaacttagtcgaatggtgacggaaattcacattcattcaaaacca
aaaacttcttgcagtaaaatggcgatactaatggattacgtaaatccgttaagggaaaga
attatgtctttcttagacaaggaacacattcaagatgctgtagactttttacaattgtat
catttaagcaaagaagattatgataatatgatggaaattatgtgcttgagtacaactcgt
tatccacaaatatccgcaaagacaaaaggggcatttacgcgcctatataaaaaaaccaat
cccattgtaacaagaaaattgaagaaaattaaagatgataatgaagagggtgaagaagat
gaagaggatgaagaatctgatgatgatgatattactaaaaatgctgctataaaggttgta
aagaaagatgaggcttctgcatctacatcaaaaggtaaaggcaaaggaaaggccaaagaa
ggagcaaaaacaggaactaaaacaactactggaggtagaggaaaaaagaagtga
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