Aethina tumida (small hive beetle): 109601868
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Entry
109601868 CDS
T06105
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109601868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109601868
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109601868
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
109601868
NCBI-ProteinID:
XP_019873717
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All DBs
Position
4:complement(join(18574471..18574543,18574598..18574820,18574871..18575101,18575273..18575385,18575442..18575887,18575942..18576088))
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AA seq
410 aa
AA seq
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MADEPDNDDQWLYGDNPDGKLPEPETEPRKSPEQPSAEEPPQENEAPTEQSQDEGPPGVE
EEDKPEEKEDGEEDGEVKQNGDGSDKDDDEDDSDDDVNVVIGDIKSSAPYTAPVNIKRGG
LISSAPLDKTKQIPQQTGKFSVEEFEQIGTINGVPANEYNLDSLEDKPWRKPGADITDYF
NYGFNEDTWKAYCERQKRIRVNESGTGLAPMNSIGLPRGPIPIMNDNSKYSGNYLAGPPP
RSVPPPLGKPDQQKISTIQVMTADRREYSRKPGFADMSVPPPNFEEFQQEYGFNPEPEPF
YGGYEPTQDSQWVVGAPPMGPPPHMMGPPMMPMHSPDRRGRESPTRRESRDRDRESSRSR
SEKPRERGERERSHRRERSRSKSRRHRSRSRSPSHRSHRKKKSRRHEDSE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaaccagataatgatgaccaatggctatacggcgacaatccggatggaaaa
ttgcccgaaccggagacggaacctagaaaaagtcccgagcaaccgtccgccgaagagccg
cctcaggaaaatgaggcgccaacagagcaatcccaagatgagggacctcctggagttgaa
gaggaggataaacccgaagaaaaggaggatggcgaagaagacggcgaagtgaaacagaac
ggagacggcagcgataaggatgacgacgaggacgacagtgacgatgatgtcaatgttgtt
attggtgatattaagtcgtccgcaccgtacacggcccccgtaaatatcaaaaggggcggc
ttaatatcctccgccccgttagacaagactaaacaaataccacaacaaactggcaagttc
agtgtagaggaatttgagcagattggcacaattaacggtgtgccagcaaatgaatacaat
ttagactcactagaggataaaccttggagaaagcctggtgctgatatcacagattatttt
aattatggttttaatgaggacacttggaaggcttactgtgaaaggcaaaagaggatcaga
gttaatgagagtggcactggtttggcaccaatgaattcaattggtttgcccagggggcct
attcctattatgaatgataacagcaaatattctgggaactatttggcgggacccccacca
aggtcagttccacccccattaggaaaaccagaccaacaaaagatcagcaccatccaagtc
atgacagcagatcgaagggagtacagcagaaagcctggcttcgcggacatgtcggtgccg
cccccgaatttcgaggaattccaacaggaatacgggttcaatcctgagccggagccgttt
tatggtggttacgaacccacgcaggactcacaatgggttgtaggggctccgccgatggga
ccgccgcctcacatgatggggccacctatgatgccgatgcattcgcccgacagacggggt
cgggaaagtccgacgcggcgcgagagtcgcgatagggatagggagagcagtaggagtcgc
tcagagaaaccaagggagcggggcgaaagggaacgatcccacaggagggagaggtctagg
agtaaatccaggaggcataggtctagatctaggagtccaagtcacaggtcacataggaaa
aagaagtccaggaggcatgaggatagtgaataa
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