Aethina tumida (small hive beetle): 109601956
Help
Entry
109601956 CDS
T06105
Name
(RefSeq) protein cycle
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd04711
Circadian rhythm - fly
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09150 Organismal Systems
09159 Environmental adaptation
04711 Circadian rhythm - fly
109601956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atd03000
]
109601956
Transcription factors [BR:
atd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109601956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
bHLH_HIF1A
PAS_4
PAS_2
bHLH_INO2
bHLH_NPAS4
Guanylate_cyc_2
TFIIA
Motif
Other DBs
NCBI-GeneID:
109601956
NCBI-ProteinID:
XP_019873821
LinkDB
All DBs
Position
2:join(30935221..30935393,30935535..30935657,30937902..30937973,30939017..30939254,30941168..30941260,30941316..30941433,30941484..30941648,30941705..30941951,30942008..30942342,30942398..30942564,30942624..30942750,30942806..30942990)
Genome browser
AA seq
680 aa
AA seq
DB search
MVARNFSVQDIPYSRLLQVPDDDRDFISIEELKPVMVQQNIHPQHYQPTYFELTGMVESP
CQNSMSYQSTQNSSNASLVDMQQVDSTHNPSRKRKASYNDTSDMDEDNGDDSKSVKTTDE
NKKQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS
YTEGHYKPSFLSDQELKCLILQAADGFLFVVGCDRGRILYVSESVSKVLNFSQGDLLGQS
LFDIIHPKDVAKVKEQLSSADLNPRERLIDAKTMLPVKTDVPQSGSRLCPGARRSFFCRM
KCKLSSQIKEEADTTTGSHRRKKQHNADKKFTVIQCTGYLKSWTPAKMGLEEQEDGDGDS
CNLSCLVAIGRILPHISTVAAATQNRSNVRPIQFISRHALDGKFLFVDQRATLVLGFLPQ
ELLGSSMYEYYHHDDIHAIADCHKIALQSTDRVTTGVYRFRTKDGGFVSLQSEWKAFKNP
WTKEVEYLISKNNLVLSDFRTVESTAGRNEGFQENFDFFAQTNKDMQRLIKTHIEASKIG
RQIAEQVVDSQRRGGESSSSNSPDPDPESSLPMPSTESQITTSAQCEQQTVPVQEYPQQQ
QTFNHVRNNVPLSSVATDPGGNSDEGIIEMIEDAVRDSPNNGPTMDGNDEAAMAVLMSLL
EADAGLGGPVDFSGLPWPLP
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgaggaatttctcggtgcaggacataccgtattcgcgactccttcaggtgccc
gacgacgaccgcgatttcatcagcatcgaggaacttaagccagtcatggtgcagcagaac
atacatccccagcattatcagcccacctacttcgagctcacggggatggtggaaagcccg
tgccagaacagcatgagctaccaaagtacccagaattcgtcgaacgccagcctggtggat
atgcaacaggtggacagcacccacaacccttcgaggaaacgcaaggcttcctacaatgac
accagcgacatggacgaagacaacggggacgactcgaaatccgtcaaaaccaccgacgaa
aacaaaaaacagaatcacagtgagatagaaaaaaggaggagggacaagatgaacacgtac
attacggaattgtcggcgatggtaccaatgtgtcatgccatgtcgaggaaactggacaag
ttgacggttttaaggatggcggtgcaacatctgaaaaccatacggggtgcagttcattcc
tacactgaagggcactacaaaccatcgtttttatcagatcaggagttgaagtgtctcatc
cttcaggccgccgacgggttcctatttgtcgtaggctgtgataggggtaggattttgtat
gtttccgaatcggtctcgaaggttttaaatttttctcagggcgaccttctgggacagagc
cttttcgacataatccaccccaaagacgtggccaaagtcaaggagcagctttcctccgct
gatctcaacccaagagaaagactgatcgatgccaaaacaatgttgccagtaaaaaccgac
gttcctcaaagtggttcccggctttgtccgggtgctagacgttcgttcttctgccgaatg
aagtgcaaactgtcgtcgcagatcaaagaggaagccgacacaaccaccggctctcataga
cgtaagaagcaacacaatgcagacaaaaaattcacggtaatacaatgtacgggttatctg
aagtcctggactccggctaagatgggtctggaggaacaggaggatggggacggcgactca
tgcaatttgtcctgtttggtggcgatagggaggatactgccgcacatttctaccgtcgcg
gctgccacacagaacagatctaacgttaggccgatacaatttatttctaggcacgcgctt
gatgggaaattcctcttcgtggatcaaagagctaccctggttttaggattcttaccgcag
gagcttttgggatctagcatgtatgagtattaccatcacgacgacatacatgcaatagcc
gactgtcataaaatagcattgcagagcacagacagggtaacgactggagtctacagattt
cggactaaggatggcgggtttgttagcttacaaagcgaatggaaggcatttaagaatcct
tggaccaaagaagtcgaatatttgatctctaagaacaatttagttttaagtgactttagg
acggtggaaagtactgccggaaggaacgaaggatttcaggaaaactttgatttcttcgca
caaacaaataaagatatgcagaggctaattaagacacatatagaagccagtaaaattggt
cggcaaatagcggaacaagtagttgactcccaaagacgtggtggtgagtcttcttcaagc
aacagtccggatcccgacccagaatcatcactaccaatgcccagtacagaatcacaaatt
acaacaagtgctcagtgtgagcagcagactgtacctgtccaggaatatcctcagcagcag
caaacattcaaccatgtgagaaacaatgttcctctatccagtgtggctacagacccaggg
ggaaactcagatgaaggaattatagaaatgatagaagatgcagttcgtgattcaccaaat
aacggtccaacgatggatggaaatgatgaggctgcgatggcggtgttgatgagtcttttg
gaggctgacgccggattgggaggtcctgtagatttttcaggattgccctggccactacct
tga
DBGET
integrated database retrieval system
