KEGG   Aethina tumida (small hive beetle): 109602348
Entry
109602348         CDS       T06105                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
atd  Aethina tumida (small hive beetle)
Pathway
atd03013  Nucleocytoplasmic transport
atd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109602348
  09122 Translation
   03013 Nucleocytoplasmic transport
    109602348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atd03019]
    109602348
   03041 Spliceosome [BR:atd03041]
    109602348
Messenger RNA biogenesis [BR:atd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109602348
Spliceosome [BR:atd03041]
 Complex C
  Other components
   EJC/TREX
    109602348
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109602348
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_WDR3_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st eIF2A DSE1_N Beta-prop_HPS5 Tricorn_2nd Beta-prop_Vps41 Beta-prop_EML RMC1_N PAC11 Beta-prop_WDR35_TULP_N CFAP251_N Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_TEP1_C B-prop_COPA_B_2nd WD40_RFWD3 TRM82_WD Beta-prop_ELP1_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_VPS8 PD40 Cytochrom_D1 Beta-prop_Nup120_160 Beta-prop_WDR11_1st DPPIV_N
Other DBs
NCBI-GeneID: 109602348
NCBI-ProteinID: XP_049819123
LinkDB
Position
2:join(18446735..18446914,18446973..18447334,18447416..18447836)
AA seq 320 aa
MFQEKIEEFQNYFKTHNKSKEYLGHSSKVHSVGWSCDGKRLASGSFDKSVCIYTLDRDRL
NKEINFKGHGGSVDQLCWHQTHPDLLSTASGDKSVRIWDTRVQKCVATINTKGENINITW
SPNGNTIAVGNKEDLVTFIDARTHKIEAEEQFHFEVNEISWNNSSDLFFLTNGQGCVHIL
SYPELKRQHILKAHPGTCICIEFDPTGKYFATGSADALVSLWDINELACVRVFTRMDWPV
RTISFSHDGQLLASASEDLIIDIGFVETGDKIADISVEAATFTVAWHPSLYLLAYACDDK
DTYDRKRDAGSLKVWGFPSD
NT seq 963 nt   +upstreamnt  +downstreamnt
atgtttcaagagaaaatagaagagtttcaaaattactttaagacccataacaaatcaaaa
gagtacttgggccattcatcaaaagtacactcagtaggttggagttgtgatggaaagaga
ctggcgtcaggctcgtttgataagtccgtgtgtatttatactcttgaccgagaccgacta
aacaaggaaattaatttcaaaggccatggaggatcagtggatcagttgtgctggcatcaa
acacaccctgatcttctaagtacagcaagtggtgacaaatcagtgagaatatgggatacc
cgagtccaaaaatgcgtagctactataaacacaaagggtgaaaatatcaatatcacatgg
tccccaaatggtaatactattgcagtaggtaataaggaagatttagtgacattcattgat
gcgaggactcataagattgaagcagaggaacagttccattttgaggtcaatgagatatca
tggaataacagcagtgatctctttttcttaactaatggtcagggatgtgtacatatttta
agttatccagaactaaaacgtcaacatattcttaaggcccatcctggtacctgtatctgc
attgaatttgatccaacaggaaagtactttgcaactggcagtgcggatgcgctcgtctct
ctctgggacatcaacgaactggcgtgtgtacgtgtgttcacaagaatggactggccggtt
cgaacgatatcgtttagtcacgatggacagctgttagcttcagcatcagaagatctaatt
attgatattggatttgtggaaactggggataaaattgcagatatttcagtagaggcggca
acttttacggtagcctggcacccgtcactctatttgttggcatatgcttgtgatgataaa
gacacttatgacagaaaaagggatgcaggaagtctaaaagtttggggatttccatcagac
tga

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