Aethina tumida (small hive beetle): 109602900
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Entry
109602900 CDS
T06105
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109602900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atd03400
]
109602900
Enzymes [BR:
atd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
109602900
DNA repair and recombination proteins [BR:
atd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
109602900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
109602900
NCBI-ProteinID:
XP_049818250
LinkDB
All DBs
Position
1:complement(join(74048649..74048766,74048819..74049327,74049381..74049532,74049587..74050478))
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AA seq
556 aa
AA seq
DB search
MPPKRKLSKKSEPETSEISPPKKSKEEPTDPESLARKGGPSKANEEKNETAPKRRGNQAK
EPADNDHGEKPSKKAQRKPAKEQTPDSEAPEDKPKKAQRKPAKESTPDSEALGDKPKRAQ
RKPAKEQTLDPEAPGDKVNKGKGKAKNSEPEQKTDVEPKNTDKVGKPKKGRGRNKLPEAG
EQSKTDSENGNVNKDKDKDKIEPTSGSGLKNGTVEHVTGDMEVEEELPKKRGRRPAKKEA
EVKEKVTPKKPSGRPKKEKPPNDEDDGNKAASHSELLNETLTKWRSLQFGTERVSAEGNV
QNFTLTSWNVDGLRAWVKKDGHSIFQHAKPDIICLQEIKCSEDKLPNEIKNIEGYHSYWC
VGKKEGYAGVGYFSKIKPIDVKFGIDDEAQDDEGRCITAEYNDYYVVGVYVPNAGRKLVT
LPKRLEWNKSFADYIKELNDKKPVIICGDMNVAHSEIDLANPKANTKNAGFTKEERDGMT
EFLSKGYVDVFRKLYPDQKDTYTFWTYMAKARARNVGWRLDYFIVSERFMDKVCDVVIHD
KVFGSDHCPLSLYLSL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaaaacgtaaactatctaagaaatcggaacccgagacttccgaaatatcacca
ccaaaaaaatccaaggaagaaccaaccgacccggaatcattggcgcgaaagggagggcca
agtaaagcaaacgaagagaaaaatgaaacagcccccaagagacgaggaaaccaagccaaa
gagccggctgataatgatcacggggaaaaaccatcaaagaaagctcaaagaaagcccgcc
aaagagcaaacaccagattctgaagcaccagaggataagccaaagaaggctcaaagaaag
cccgccaaagagtcgacaccggattccgaagcactaggcgataagccaaagagggctcaa
agaaagcctgctaaagagcaaacattggatcccgaagcaccaggggataaagtgaacaaa
ggaaaaggtaaggcgaagaactctgaaccggaacaaaaaaccgatgttgaaccgaaaaat
acggataaagtaggaaagccaaagaaaggcagaggtaggaacaagcttccagaagctggc
gagcaatccaaaaccgactcggagaacggaaacgtaaataaagacaaagacaaagacaaa
attgagccaacttcaggaagtggtttgaagaatggaactgtagaacacgttactggggat
atggaagttgaggaagaacttccaaagaaaaggggtagacgaccagccaaaaaggaagca
gaagtgaaggagaaggttacaccaaaaaaacccagtggtcgacccaaaaaagaaaagcca
cctaacgatgaagatgatggaaataaagcagcaagtcattcagaacttctaaatgagacc
ttaaccaaatggaggtctttacaatttggcactgaaagagtatctgcagaaggcaatgtt
caaaatttcacgttgacgtcctggaatgttgacggtctgagggcctgggtgaagaaggat
ggacattccatttttcagcatgcgaaaccagacatcatctgcctccaggagatcaaatgt
agtgaagacaaattgcctaatgagattaaaaatatagagggttaccattcatattggtgt
gtcggcaaaaaggaaggttacgcaggcgtaggctatttttcgaaaatcaaaccaatcgac
gtgaaatttggaattgatgatgaggctcaagacgacgaaggcaggtgcattacggccgag
tacaatgattattacgttgttggagtttacgtgccgaatgcaggcagaaaattagtcact
cttcccaaaagactggaatggaacaaatcttttgcggattatatcaaggaattgaacgac
aagaagcccgtcatcatttgtggcgacatgaatgtagcacattcggaaatcgatttggct
aatcccaaagccaacaccaagaatgccggtttcacgaaggaggaacgggacggaatgaca
gaatttttaagtaagggctacgtcgatgtattccgtaagttgtatcctgaccaaaaggat
acttacacattttggacatacatggctaaagccagggccagaaacgttggatggcgtttg
gattatttcattgtttctgagcgatttatggataaggtgtgtgacgtggtgatccacgac
aaagttttcgggtcagatcattgtcctctaagtttgtatttgagtttataa
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