KEGG   Aethina tumida (small hive beetle): 109602938
Entry
109602938         CDS       T06105                                 
Name
(RefSeq) cleavage stimulation factor subunit 1-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
atd  Aethina tumida (small hive beetle)
Pathway
atd03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:atd00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109602938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atd03019]
    109602938
Messenger RNA biogenesis [BR:atd03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     109602938
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML CSTF1_dimer Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_Vps41 Ge1_WD40 Beta-prop_WDR41 Beta-prop_HPS5 eIF2A Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_RSE1_2nd Beta-prop_LRRK2 WD40_like Mcl1_mid Cytochrom_D1 Beta-prop_IFT122_2nd Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 109602938
NCBI-ProteinID: XP_019874941
LinkDB
Position
4:complement(join(5118877..5119518,5119571..5119959,5120010..5120188,5120241..5120338))
AA seq 435 aa
MSNNENPNPNRNLDPDPKDRIKTRDYLYKLLISQLIYDGYHTLAQAVANVIPVEVSYCPS
ERLYNIFVRGLENEPEKKDSPDNFGFGLGHGLDLEYDHECKIPAPEPALYQTAYVTSHKG
SCRAGCFSSDGQLVATGSVDASIKILVADRMLAKSSPDEMDPSRHEPQGHPVIRTLYDHM
DEVTCLAFHPKEQILCSGSRDQSVKLFDISKANVKKAYKTITETEPIKCLAFHPSGEHLV
VATKHPVIRMYDVNTLQCYVCAIPNQQHTSTVVCLKWSMDARIFVSCSKDGSIKLWDGVS
NRCINTFDKAHEGYEVCSIQFSKNGKYVLSSGKDSMCRLWELSTSRCLMTYTGAGTVGKQ
RYETQAVFNHTEDYVLFPDEVTTSLCAWNAKNGSRLQLMSLGHNGPVRMLVHSPTQAAFL
SCSDDFRARFWYRRM
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgagcaataacgaaaaccccaaccccaaccgaaacttggatcccgacccaaaagatcgc
ataaaaaccagagactacctttacaaacttctaataagtcaactaatttacgacgggtat
cacacccttgcccaagctgtggccaacgttatccccgtggaggtttcctattgccccagt
gaaagactctacaacattttcgtgcggggcctagaaaatgagccggagaagaaggactcg
cctgataacttcggttttggactaggacacggactagacttggaatacgatcatgaatgc
aaaatacctgctcccgaacccgccctgtaccaaacggcctacgtgacctcccacaagggc
agctgcagagctggctgtttctcctctgatggacaactggtggctaccggtagtgtggac
gccagcattaagatattggtggcggacaggatgctcgccaagtcctcaccggatgaaatg
gacccttccagacatgagccacaaggccaccccgtcatcaggacattatacgaccacatg
gacgaagttacttgtctggccttccatcccaaggaacagattttgtgttccggctccaga
gatcaatccgtcaagctgtttgacatatccaaagccaatgtgaagaaggcctacaaaacc
atcaccgaaactgaaccaattaaatgtttggcgtttcacccctccggtgaacatttagtg
gtggctactaagcacccggtgatccgcatgtacgacgtcaatactttgcagtgttacgtg
tgcgccattcccaaccagcaacacacatcaaccgttgtgtgtcttaagtggtcaatggac
gcgaggattttcgtcagttgcagcaaggacggctccattaaactatgggatggtgtatcc
aatcgttgcatcaacactttcgacaaagcccacgaaggctacgaagtttgctccatccaa
ttctccaagaacggcaagtacgtcctgagctccggcaaggattccatgtgcaggttgtgg
gagttatccaccagtagatgtctgatgacttatactggggctgggacggtggggaagcaa
cgatacgagactcaagctgtttttaatcatacggaggattacgttctgtttcccgatgag
gtgaccacctcgttgtgcgcctggaatgccaaaaatgggagcaggctgcaattgatgtcc
ttgggacataacgggcctgttaggatgttagttcattctcccactcaggctgctttcttg
agttgctccgatgattttcgggccagattttggtacagacgtatgtga

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