KEGG   Aethina tumida (small hive beetle): 109604061
Entry
109604061         CDS       T06105                                 
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
atd  Aethina tumida (small hive beetle)
Pathway
atd04382  Cornified envelope formation
atd04512  ECM-receptor interaction
atd04518  Integrin signaling
atd04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:atd00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109604061
   04518 Integrin signaling
    109604061
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109604061
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    109604061
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atd04147]
    109604061
   00536 Glycosaminoglycan binding proteins [BR:atd00536]
    109604061
Exosome [BR:atd04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   109604061
Glycosaminoglycan binding proteins [BR:atd00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109604061
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 109604061
NCBI-ProteinID: XP_049822683
LinkDB
Position
4:complement(join(17932483..17933328,17933390..17933504,17933612..17934026,17934084..17934914,17935185..17936582,17936644..17936759,17936840..17937323,17937384..17938167,17938227..17938457,17938514..17938798,17938858..17938902,17938958..17939152,17993813..17993896))
AA seq 1942 aa
MTLRPGLCRAVALVVLLVFTIVSRSDASCQGGCPNAYKCDCSGIKGRPGSEGIRGMAAMA
GDYGDQGLPGPVGPKGEKGAVGEYGSEGERGPRGDMGPQGMEGLPGRPGAAGETGMRGPP
GLDGCNGTDGAYGVDGQVGIPGERGAPGPLGMIGLPGEPGDGGGNSMGIKGDYGEVGIDG
EAGEPGIRGSIGFKGYRGPPGQSGVTGEAGPKGFPGDAGETIYGIKGLKGEQGPQGKPGP
SNSIMPPSYLIHKGIKGPKGQMGERGVRGYAGPRGDLGRLGIKGVAGPQGPRGDQGLDGP
HGKQGKIGPAGPAGEKGDKGAPGYAGVDGIDGAKGEIGEDGQRGLPGPQGYPGPPGIYDP
TLDEPAMPGSQGRQGPDGPVGERGMAGIPGRPGLPGPLGPPGAPGPRGYQGAPGRRGTSV
KGERGDDGLPGLRGNSGPPGVPGEVGAIGEKGYKGEDVIGPPGEPGIPGNPGFDGPPGDR
GDTGDDGPKGYPGTGVPKRGPPGEKGLRGLPGLPGDDGYPGAPGLDGLKGKRGDDCGYCT
PGSPGPKGERGEPGRLGRPGTTGYTGIPGHRGPKGLPGQPGPVGRKGVRGAPGSAGQEGI
PGPKGAKGILIYPPQNQTKTEAGDLGDWGVPGLMGPDGPKGPIGSVGAPGFLGLKGIRGD
DGTPGRAGLPGLPGLPGAIGQKGEPALGPKIFYKGEKGRKGPMGDVGEPGLDGRRGYAGD
SFAPKHNLKGDEGVPGVIGEPGRVGRPGPKGFKGDQGYFGPPGRPGLAGISIDGPVGFKG
FPGYPGDEGPRGPAGKEGTMGLPGVSGLRGRKGDRGELGKSILFGEMGTMGPTGEKGDVG
DYGPDGLPGRPGFPGVKGVKGSKGAPGFAGADGREGPKGQQGVSVPGYPGLEGLPGAKGA
QGRFGLIGEKGDTGQMGYIGAKGAKGDSGLQGLQGFPGDEGEPGFPGRKGFNGRPGIPGL
PGERGDIGFRGPQGIFGPKGALGEVGFQGLRGDTGFPGQPGIMGEPGLKGERGTPGIPGL
DGQKGEAAFSGEQGESGTPGPRGAPGLDGLPGYPGPKGESGTPGIDVIGPKGIKGIQGEP
GITGRFGYPGEKGERGMNGLPGTIGLRGEKGFRGADGTPGFDGLPGIKGQLGDIGIPGSL
GPKGEEGMSGEPGPMGRPGIVGDVGSIGPPGPFGDQGPKGDRGLPGYPGFGFAEKGDVGD
IGMHGFDGFKGQRGDVGYPGPVGIKGERGDDGLRGLTGEPGFPGIKGEKGDYGLPGQNGL
PGQNPERGDEGLPGFPGLPGIPGRPGQKGAPGEVGLNGPEGIPGMPGLSFPGEKGVRGDV
GFAGRQGLAGEEGAPGVSGRPGIDGAKGVRGDYGFASDALKGQKGEIGLIGLQGYPGLKG
ERGEPGLDGLPGQQGLPGWKGQRGDRGLPGFDGPPGPRGIKGEKGDIGMPGLPGYVGLPG
DAGLPGLQGERGYPGIQGSIGLRGRKGERGEIGLIGLTGYKGIKGESGDNGFPGRDGARG
LRGRQGPPGENAPPAPGPKSRGFYFARHSQSEITPQCPLDTIKLWDGFSILSTGGSEKPH
GQDLGAAGSCLRKFNTMPFLMCDGEACNYAQNNDYSYWLSTSEPMPAMMTPIPAAETTRY
ISRCSVCEATTRVMAVHSQSSEIPDCPKGWDELWRGYSFLMTSDNGAYGTGQSLVSPGSC
LEEFRPSPFIECHGHGRCNYYNSATSFWLAIIQESEMFRKPRSETLKAGALTSRISRCSV
CIRSRIVLNQQIPPSQISKHPYQQPSGSQYGQQGGVYRQGVYQYGQQGGSYQQGGSQYEQ
HGGSYQQGGSQYGQQGGYRKVSGGGYSSSEQSGNQGGYRGGQTGWSTYQSGERSSETGRS
QQGGTQFGSRTSRPQWQRSGSYPPFTESQASYGQGGQNLEGPRRGDQSSYNYKHLQGAPR
RRIRPRPGGYSYNINRKQPVPA
NT seq 5829 nt   +upstreamnt  +downstreamnt
atgacgctgcggccgggactgtgccgggcggttgccctagtggtacttctcgtttttacg
attgtgagccgttcggacgcttcgtgtcaagggggatgtccgaacgcctacaaatgcgat
tgttccggtataaagggccgacccggctcggagggaataaggggtatggccgccatggcc
ggcgactatggtgaccaaggtttgccaggtcctgtgggaccgaagggagagaaaggtgcc
gtcggtgaatacggaagcgaaggtgaacgcggtcctagaggtgacatgggtcctcaaggt
atggaaggtttgccaggaagaccgggtgccgccggagagactggtatgaggggacctcca
ggtcttgacggctgcaacggtaccgatggcgcttacggtgtcgatggacaagtgggtata
cctggagagagaggtgcacctggtccattgggtatgatcggtttgcccggtgaacctggt
gacggtggcggaaactccatgggcataaaaggcgattatggtgaagttggtattgatgga
gaagctggtgaacccggtataagaggatctattggatttaaaggatatcgaggcccgcca
ggacaatcgggtgtgactggtgaagctggtcctaaaggatttccaggtgatgccggagaa
acgatatacggtattaaaggtcttaagggagaacagggtcctcagggaaaaccaggtcct
tcaaactctattatgcctcctagttacctaattcataaaggaattaagggtccaaaagga
caaatgggtgaaagaggtgttcgtggatacgcgggacccagaggagatctaggacgtctc
ggtattaaaggtgtggctggaccacaaggtccaagaggagaccaaggcttagatggccca
catggaaagcaaggaaaaattggtccagccggtccagcaggagaaaagggagataaaggt
gcccccggatatgccggagttgatgggattgatggagccaagggtgaaattggtgaagat
ggacaacgtggattacctggtcctcaaggatatcctggtcctcctggaatctacgaccct
accttagacgaacctgccatgcctggtagtcaaggaagacaaggacctgatgggccagtc
ggtgaacgtggaatggctggtattcccggtaggccaggtttacctggaccattaggtcct
cctggagccccagggcccagaggatatcaaggagcaccagggcgaagaggtacttctgta
aaaggagaaagaggagatgatggtttgccaggccttcgaggaaactctggtcctcctggt
gttcccggagaagtgggtgccatcggcgagaaaggttacaaaggtgaagacgttattggg
cccccaggtgaacctggaattcctggtaaccctggattcgatggacctccgggagataga
ggagatactggtgatgatggtccaaaaggttatcctggtacaggagtacccaaacgtgga
cctccaggggaaaaaggtttgagaggtctaccaggtcttcctggagacgatggttatcct
ggtgctccaggtcttgatggtctcaagggaaaacgaggagatgattgtggatattgtact
ccaggaagccccgggcccaaaggtgaaagaggtgagccgggtagattaggaaggcctggt
acaactggttataccggtatacctggtcaccggggaccgaaaggtttgcctggccaacct
ggcccggtaggtcgtaaaggtgtaagaggagcaccaggtagcgctggacaagaaggcatt
cctggaccgaagggcgcaaaaggaatcttaatatatccaccacaaaatcaaacaaaaaca
gaagcaggagaccttggcgattggggtgttccaggtcttatgggaccagatggcccaaaa
ggtcctattggttctgtaggtgcacctggtttcttggggttaaagggtattcgtggagac
gatggaactcctggacgtgctggtttgcctggtttacctggtttaccaggtgcaattggc
caaaagggagaacctgcattaggcccaaaaatcttctataaaggagaaaaaggtcgcaaa
ggacccatgggagatgtgggagaacctggtctagatggacggagaggatatgcgggagat
tcatttgcgccaaaacataacttgaaaggagatgagggagtacctggtgtaattggtgaa
ccaggacgtgtaggaagaccaggacctaaaggtttcaaaggagatcagggatacttcgga
ccaccgggccgacccggtttggcaggaattagcatcgatggacctgttggatttaaagga
tttccggggtaccctggagatgaaggtccaagaggaccagctggaaaggaaggtactatg
ggacttcctggagtgtctggcttaagaggtcgcaagggagatcgaggagaacttggaaaa
agtatactatttggagaaatgggtactatgggtccaacaggagaaaaaggagatgttggc
gactatgggccagatggactacctggaagacctggctttcctggagtcaaaggtgtgaag
ggctccaagggtgccccaggttttgctggtgctgatggaagagagggaccaaagggtcag
cagggtgtatcagtacctggctatccaggattagaaggtctcccaggagctaagggtgcg
caaggacgctttggtttgattggagaaaaaggagacacgggtcaaatgggatatattggt
gcaaagggagctaagggagattctggactacaaggacttcaaggcttccctggtgatgaa
ggtgaacctggttttccaggacgtaaaggatttaatggaaggccaggaattcctggctta
ccaggggaaagaggtgacatcggattccgaggaccacagggaatatttggacctaaagga
gctcttggagaagttggtttccaaggattaagaggagataccggatttccaggacagcct
ggtataatgggtgaaccaggtctgaagggtgaacggggaactcctggtattccgggattg
gatggtcagaaaggtgaagcggcatttagtggagaacaaggagaatctggaacacctgga
ccacgtggcgcacccggtcttgatggtctacctggatatcccggacctaaaggagaaagt
ggtactcctggtattgatgtaattggtcctaaaggaataaagggaatacagggcgagcct
ggtataactggaagatttggatatcccggtgaaaaaggagaaagaggaatgaatggatta
ccaggaacgataggtttacgaggtgaaaaaggatttagaggcgcagacggtactccaggt
tttgatggtttgccgggaataaaaggccaacttggagatattggtattcctggaagctta
ggtccaaaaggagaagaaggtatgtcgggagaacctggtcccatgggtcgtcccggtatt
gttggagatgtcggaagcattgggccaccagggccatttggagatcaaggtccgaaagga
gaccgtggtttaccaggatacccgggatttggttttgctgaaaaaggagacgttggagat
attggaatgcatggttttgatggattcaaaggacagcgtggagatgtaggatatcctggt
ccggtgggaattaaaggtgaaaggggcgatgatggtctacgtggattaactggtgaacca
ggatttcccggaattaaaggagaaaaaggtgactacggtcttccgggtcaaaatggttta
cctggacaaaatccagaaagaggagatgaaggactcccaggtttccctggtctaccgggt
attccaggaagaccaggccaaaaaggagctcctggagaagttggtttgaatggtccagaa
ggtatcccaggaatgcccggtttgagttttcccggtgaaaaaggagttaggggtgacgtt
ggatttgccggcaggcaaggtctggctggcgaagaaggagctcctggagttagtgggcga
ccaggaattgatggtgccaaaggagtgcgtggagattacggttttgcatcggatgcactc
aaggggcaaaagggagaaatcggtttaattggtttacaaggttatcctggattgaaagga
gagcgtggtgagccaggcttagacggattacccggacaacaaggtttacctggatggaag
ggtcagagaggagatcgcggattacctggatttgatggaccaccgggaccaagaggaata
aagggagaaaagggagacatcggaatgcctggacttccaggatatgtaggtttgcccgga
gatgctggtctacctggtctgcaaggagaacgtggatatcctggtattcaaggatctatt
ggattacgtggtagaaaaggagaacgtggtgaaataggtctaattggattgactggatac
aaaggcatcaaaggtgaaagtggtgacaacggttttccgggaagagatggtgcacgaggt
ttacgaggacgacaagggcctcctggagaaaacgcacccccagcacctggacctaaaagt
cgtggattttacttcgctcgacattcccaatcagaaattactcctcaatgtccactagac
actattaaattatgggatggattctctatattgagtactggtggctctgaaaagcctcat
ggacaggatctaggagctgctggaagttgcttaaggaaatttaacaccatgccatttttg
atgtgcgatggtgaagcatgcaactatgcgcagaacaatgattacagttactggttgtct
acatcggaacccatgcctgctatgatgacgcccattcctgctgcagaaacaactagatat
atatccagatgttctgtgtgtgaagcaactactagggtaatggctgtacatagtcagtca
agtgagattccagattgcccaaaaggttgggatgaactttggagaggatacagttttctt
atgactagtgacaacggcgcatatggcacaggccaatctcttgtatccccaggatcatgt
cttgaagaattcagaccgagtccatttattgaatgtcacggccacggaagatgtaactat
tacaattcagctacgtccttctggttggcaattatccaagagagtgaaatgtttagaaaa
ccacgttccgaaacccttaaggctggcgccttgaccagcagaatcagtaggtgttctgta
tgtatcagaagccgcatcgttctgaatcaacaaattccaccaagccaaattagcaaacat
ccttaccaacaaccaagtggttcgcaatacggacaacagggaggtgtttaccgacagggt
gtatatcagtatggccaacagggcggtagctatcaacaaggtggctctcagtatgaacaa
cacggcggtagttaccaacaaggtggctcccaatacggccaacagggaggttaccgaaaa
gtaagcggtggaggttattcttcaagtgaacaatccggaaatcaaggcggatacagaggc
ggacagaccggttggtcgacttatcaatctggagagcggtcaagtgagacaggaaggagc
caacaaggaggcacccaattcggatctagaacatccagaccgcaatggcagagatctggt
agctacccacctttcaccgagtcccaagcaagttatggtcaaggtggacagaatctggaa
ggtccaagaaggggagatcaatcaagttataactacaaacatttgcaaggtgcccctaga
agaagaattcgtccaaggcccggcggatattcgtacaacataaatagaaaacagcctgtt
cccgcctag

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