Aethina tumida (small hive beetle): 109604212
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Entry
109604212 CDS
T06105
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
atd
Aethina tumida (small hive beetle)
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atd04131
]
109604212
Membrane trafficking [BR:
atd04131
]
Protein recycling
Others
EARP complex
109604212
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
Vps5
Motif
Other DBs
NCBI-GeneID:
109604212
NCBI-ProteinID:
XP_019876305
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All DBs
Position
6:join(19668923..19668967,19669024..19669212,19669267..19669578,19669635..19669823,19669880..19670098,19670157..19670437,19670492..19670681,19670741..19671241,19671297..19671605,19673083..19673363,19673418..19673607,19673665..19673784)
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AA seq
941 aa
AA seq
DB search
MDELKQKILGLLNKQPAKIPSMGFNDANYHFPQVPTLSINSKTVQDIDRPADQDILESIE
AAYFSMNQDFDICRFELTKLPEVLDCDQIQRDFKNLKIQHQVVSKKVLQLILEHQNGCNG
EFEKILEILGQVHETLELCRSSRKELSVAGKQFSASLSILANYRKRKLAQNLLNNLTMIK
TLYSFDKRCQELLRNEDYGGAILELKKCQKTAIKYRHFSCVASLTYKLQETLENTDTQLD
RVLSQMCFHFDGERYGKLRKAYNLLDKSDVSMIDNLHVHYITAIYNSSFNVVHSYVTSTD
VLDNSENSGKNPYKILCQSVGQDVFIPCLIHLCKVLFKIVLSYYQLVKYCNSEMESGGLE
NVENGQKKQKLDHYLIKIWDDVQRKVSSLLLNADLATYKFDQFVQVLRVVHRLIQVGEEF
CGSKSEDLQESIRKQSVNYFKNYHSQRMDELKIFLENEMWEICPVKPTFDVLQLQEFKSV
RNSLRNYKLNPLNSGVYSTNSTECSSSHSQDGSSITGNYFMRFAEHGTPFDMNLDETIIE
EDILASDNNSGYFTDESDEENEELKRDYVDEYDENVAIKKREKHSNKSPILTNTTLTVLR
QMGKYIQMSRLLKSIAYQIITCMNQLFDYYLYSVHLFFASDLPVASNSLYSQELTITLKK
ISDNLIMENVEENEENLEEQGKVYKPVLSPMVDLNSGEKLYGLAERIVAVESLVFLSKQY
EFLQEYLEYLVPQTNKIMLQQFFTQNISSARDTRIPIYMTVVARTFDLRQILVSMSKINW
EVKDVMSQHNSYVDMILRTVQIFTLRLEEVVAKVPVNAEVSRTLWENIAHIITHTLVQGF
SEAKKCSNGGRALMQLDFTQFLSKFEKISSLRPVPHKEYVENYVKAFYLPEVELEQWIRE
HKEYSSKHLFGLVSCACQNNKKTKQRLLQVVEEMEKQPQNR
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggacgaactaaagcaaaaaatcctaggcctgttgaataaacaacctgccaaaattcca
tcgatgggctttaacgatgcgaactatcattttccgcaagttcctacgttgagtatcaac
agcaaaacggtacaagacatcgacagacctgcagatcaggatattttagagagcattgaa
gctgcctacttttccatgaaccaagactttgatatctgcagatttgaacttactaaacta
ccagaagttttagattgtgaccaaatccaaagggactttaagaatttaaagatccagcat
caggtggtttcaaaaaaagtgttacagttgattttggaacaccagaatggttgcaatggg
gagtttgaaaagatcttggagattttaggtcaagtacatgagactttggaactgtgtagg
agcagtaggaaagaactgagtgttgcagggaaacaattttctgcgagtttgagcatttta
gctaattatcgcaaacgtaaactcgcccaaaacctactcaacaatctcacaatgatcaaa
acattgtacagttttgataagagatgtcaggagttgttgagaaatgaggattatggaggt
gctattttagaattaaaaaagtgccagaaaacggccattaaatacagacatttcagttgt
gttgcttctttgacttataaactgcaagaaacgttagaaaatacagacacacaacttgat
agagtcctttcacaaatgtgttttcatttcgacggcgaacggtacggtaaattaagaaaa
gcgtataatttgttggacaaatcggatgtttctatgatcgataatttgcacgtacattat
attactgcgatatataactcttcctttaacgtcgtccattcgtacgttacttccacagat
gtactggataattctgaaaattcgggaaagaatccttataaaattctatgtcaatccgtg
ggacaagacgttttcataccgtgtttaatacacttgtgcaaagtattattcaaaatagta
ttgagttattatcagttagtaaaatattgcaacagtgaaatggaaagtggaggtctggaa
aatgtggaaaacggccagaaaaaacaaaaactggatcattatttgataaaaatctgggac
gacgtgcaaagaaaagtttccagtttgcttttaaatgccgatttggccacgtacaagttt
gatcaattcgtgcaagttttacgcgtcgttcatcgtttgattcaagtgggcgaggaattt
tgcggaagcaaatcggaagatttacaggaatcgatccggaaacaaagcgtcaactacttt
aaaaactatcacagccaacggatggacgagttaaagatatttttggagaatgaaatgtgg
gagatttgtcctgtaaaacccacatttgatgtcctgcaactgcaagagtttaaatcggtt
agaaactcgttaagaaattacaaattaaacccgttaaattcgggcgtttattcaacgaat
tcgacggagtgttcgagttctcattcccaggacggaagcagcataacgggcaattatttt
atgagattcgcagaacacggaacgcctttcgacatgaatttagacgaaacgatcatcgaa
gaggacatcttagcttccgataacaattccggttatttcacggacgaatccgatgaggaa
aacgaagagttgaaacgggattacgttgatgaatacgacgagaatgttgctattaaaaaa
cgagagaaacatagcaataaaagtcccattttgacgaacacaactctgacggttttaagg
caaatgggaaaatacatacagatgtccagactgttgaaatctattgcttatcagattatt
acgtgtatgaatcagttgtttgactattatttgtactctgtacatttgtttttcgcctca
gatctgcccgtggcgagtaattcactgtactctcaagaattgacaataacattgaaaaaa
ataagtgataatttgataatggaaaatgtggaagaaaatgaagaaaatttggaggagcaa
ggtaaagtttacaagcctgttttgtctccaatggtggatttaaatagcggcgaaaaattg
tacggtttggccgagcgaattgtggccgtcgaaagtttggtttttctctccaaacaatac
gaatttttacaggagtatttggaatacctggtgccacagaccaacaagataatgctgcaa
cagttctttactcagaacatttcgtcggcaagagatacgaggattccgatttacatgaca
gtggtagcacgaacgttcgatcttcgccaaattctcgtttcgatgtcgaaaataaattgg
gaagtcaaagatgtgatgtcgcagcacaattcgtacgtcgacatgattttacgcaccgtt
caaatattcacgttacgtttggaggaggtggtggcgaaggttcccgttaacgccgaagtg
tcgcgcaccttgtgggagaatatcgctcacataatcacgcacactttggttcagggattt
tctgaggcgaaaaagtgctcgaacggaggaagggcgttgatgcaattggatttcactcag
ttcttgagcaagtttgagaagatttcgtcgttgagaccggtaccgcacaaagagtacgtc
gaaaattacgtgaaggccttttatttacccgaagttgaactggaacaatggattagagaa
cataaagagtattcttcgaagcatctgtttggtttggtcagttgtgcgtgtcagaataat
aagaaaacgaagcagagattgttacaagtcgttgaagaaatggaaaagcaaccgcaaaac
agataa
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