Aethina tumida (small hive beetle): 109605614
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Entry
109605614 CDS
T06105
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03018
RNA degradation
atd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109605614
09123 Folding, sorting and degradation
03018 RNA degradation
109605614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109605614
03041 Spliceosome [BR:
atd03041
]
109605614
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109605614
mRNA degradation factors
5'-3' decay
Lsm complex
109605614
Spliceosome [BR:
atd03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109605614
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
DUF1820
Motif
Other DBs
NCBI-GeneID:
109605614
NCBI-ProteinID:
XP_019877765
LinkDB
All DBs
Position
6:complement(join(12781074..12781164,12781220..12781347,12781404..12781444,12781514..12781544))
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AA seq
96 aa
AA seq
DB search
MASGLDTFVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTTGVEQVMLGLH
IIRGDNVAIVGLIDEEVDNRLNLASIKAEPLNAVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggactcgacacttttgtaaaccataccgtatcaattataacatcagatggc
cgtaattttatcggcacattgaaaggctttgaccaaaccataaatataattcttgatgag
tcacatgaaagggtctattccacaactacaggagttgaacaagttatgctaggcctgcac
attattcgaggcgacaatgtggcaatcgtaggattaattgatgaagaagtagacaataga
ctaaatctagctagtattaaggctgaaccattaaatgctgtggtacattaa
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integrated database retrieval system
