Aethina tumida (small hive beetle): 109605840
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Entry
109605840 CDS
T06105
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03030
DNA replication
atd03410
Base excision repair
atd03420
Nucleotide excision repair
atd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109605840
03410 Base excision repair
109605840
03420 Nucleotide excision repair
109605840
03430 Mismatch repair
109605840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atd03032
]
109605840
03036 Chromosome and associated proteins [BR:
atd03036
]
109605840
03400 DNA repair and recombination proteins [BR:
atd03400
]
109605840
DNA replication proteins [BR:
atd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109605840
DNA Replication Termination Factors
ELG1-RFC complex
109605840
Chromosome and associated proteins [BR:
atd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109605840
DNA repair and recombination proteins [BR:
atd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109605840
Check point factors
HRAD17(Rad24)-RFC complex
109605840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Mg_chelatase
Rad17
AAA_30
DUF815
ResIII
AAA_22
AAA_16
AAA_11
Gp44_lid
AAA_assoc_2
AAA_24
AAA_14
SLFN-g3_helicase
AAA_19
RuvB_N
DNAX_ATPase_lid
AAA_5
Kinesin
AAA_7
KH_DUF2096_C
bpMoxR
Microtub_bd
ATPase_2
AAA_3
Motif
Other DBs
NCBI-GeneID:
109605840
NCBI-ProteinID:
XP_019877996
LinkDB
All DBs
Position
4:join(3637614..3637726,3637777..3638052,3638111..3638702,3638756..3638851)
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AA seq
358 aa
AA seq
DB search
MQAFLKSGKLGEPSTSKQVDTIISHEKQSKPVPWVEKYRPKTVADVVEQNEAVTVLEECI
KGADVPNLLFYGPPGTGKTSTMLAAAKQLFGDLYRQRILELNASDERGIQVIRDKVKTFS
QLTASSVRNDGKPCPSFKIVILDEADSMTYAAQAALRRTMEKESKSTRFCLICNYVSRII
PPLTSRCTKFRFKPLNESMIFERLQYICKQEGVICSDESLNKLVETSGGDMRRAITCLQS
CSKLKGLGVPISVENITEVTGVVPDKLLQGFLDVCADRNIGKLQEYLSKIMLQAYSASQI
LEQLNELIVESDKFTDPQKAVIGEKLGVVSFRLLEGGSEYLQLLDLGCTIIKAHNLST
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcttaaaatccggaaaattgggggaaccatccaccagcaaacaagtcgac
accatcatatcacacgaaaaacaatccaaacccgtaccatgggtagaaaaatatcgtcca
aaaacagtggcagacgttgttgaacaaaacgaagccgtcacagtattagaagaatgtatc
aaaggtgcagatgtgcctaatctgttgttctatggtcctccaggtactggtaaaacaagt
actatgctggctgcagctaaacaactcttcggtgacctctacagacaaagaatattagaa
ctgaatgcctctgatgaaagaggcatccaagtaatcagagacaaagtaaaaacattctcc
caattaactgccagtagtgtcagaaatgatggaaagccttgtccatcattcaaaattgta
atattggatgaagcagactctatgacttatgcagcacaggctgccctaagaagaaccatg
gaaaaggagtcaaaatcaaccagattttgtctcatctgcaattatgtgtcaagaattata
ccaccactaacatcaagatgcaccaaattcagatttaaaccactgaatgagtcaatgata
tttgaaaggttgcagtacatttgtaaacaagaaggtgtcatttgctcagatgaatctctg
aacaagcttgtggaaactagtggtggagacatgagaagagccataacttgccttcaaagc
tgctccaaactgaagggccttggtgtaccaatatctgtagaaaatattactgaagtcaca
ggagttgttcctgataaactcttgcaaggcttcttggatgtatgtgctgacaggaacata
ggaaaactgcaagaatacctttctaaaataatgttacaagcatattctgcttcacagata
ttggaacagttgaatgaacttatagtagagtctgataaatttactgacccccaaaaagca
gtcattggcgaaaaattaggggtggtgagtttccgtcttttggaaggaggatcagaatat
ttgcaactgctggatttaggatgtactattattaaagctcacaatctgagtacataa
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