Aethina tumida (small hive beetle): 109606261
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Entry
109606261 CDS
T06105
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109606261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109606261
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109606261
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109606261
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
109606261
NCBI-ProteinID:
XP_019878383
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All DBs
Position
6:complement(join(10843399..10843617,10843675..10843895,10843957..10844131))
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AA seq
204 aa
AA seq
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MRKTTCLCLPGQRLSLCDKTHVSGQGTYERLGYIYSMLAGTVDVVEKDGIQIIEVHSKGE
QTVVPTQGDIVTAQVCVISQPHAKCVIKCVGDTVLRRPFKGVLRKEDVRATEKDRVEIFK
CFRPGDIILARVLPITEAHNYQLSTAENELGVVIAHSEYGHPMVPVSWTEMQCTKTFVKE
GRKVAKVVPENVKSLPRNKKEINT
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaactacatgcctatgccttcccggtcaaagactctctttatgtgacaaaacc
cacgtttccggacaaggcacgtacgaacgactaggctacatttactcaatgctagcgggg
accgtggacgtcgttgaaaaggacggcatccaaatcattgaagtgcattcaaaaggtgag
cagacagtggtgccgacacagggagacatagtaacagcccaggtgtgcgtgatatcgcag
ccgcacgccaaatgcgtgatcaaatgtgtgggcgacacggtcctgcgacgaccgttcaag
ggggtgctgcgtaaggaagacgtacgcgccaccgaaaaggacagggtggaaatattcaag
tgtttcagacccggggacataatactggcacgagtcctgccgatcacagaagcgcacaat
tatcagttgtcgacggcggagaacgagttgggagtggtgattgcacattcggagtatgga
catccgatggtgcctgtgtcttggactgaaatgcagtgtacgaagacgttcgtgaaggaa
ggcaggaaggttgctaaagttgtgccggagaatgttaaaagtttacccagaaataaaaag
gaaataaatacatag
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