KEGG   Aethina tumida (small hive beetle): 109607051
Entry
109607051         CDS       T06105                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
atd  Aethina tumida (small hive beetle)
Pathway
atd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:atd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109607051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atd03021]
    109607051
Enzymes [BR:atd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     109607051
Transcription machinery [BR:atd03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     109607051
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 109607051
NCBI-ProteinID: XP_019879135
LinkDB
Position
6:join(19489178..19489361,19489415..19489591,19489644..19489826,19489885..19490285,19490343..19490480,19490540..19490674,19490733..19490953,19491010..19491139,19491197..19491419,19491479..19491593,19491649..19491841,19491896..19492395,19492445..19493024,19493083..19493237,19493293..19493515,19493574..19494007,19494060..19494399,19494459..19494915,19494975..19495093)
AA seq 1635 aa
MAKTGHRFDILHPKHLNPENLTFSMFTAEEIKKLSVVEILTPLMFDTLGNPVPGGLYDKR
LGPMSEKSDPCGVCYKNSYLCPGHFGHISLPLPLINPLFHKIIATILKISCLSCYKLQIS
GHIKKSLVIKLKLLNCGLVTEAQEVDNVITDLINQFETIENIPEDKLECINKYETLVEKY
SSDNDYKTFNNKNVEMLRNQFVNGLLKEVKSRKSCIHCKTPINPMKILKNKIILTTPKLE
QSHDANTSSLASKLKVMESKYVTPEESKRYMRQIWAEEEEFLGHILSVLNGVKCEHPTDV
FFFEVIPVPPTNVRPVNIVNDRIMENPQTQNYKQILFDILTLKTIIGFVQNKAENVSAQA
KELYNACRGATAIEKLNNCWEELQNDVNGLLDKENVHSKEGNGLKQIIEKKSGVIRMHMM
GKRVNYAARSVITPDPNLNIDEIGIPETFAKHLTYPVPVTSWNVQEMRKLIQNGPNVHPG
ATMVEFEDGKIIRINTSNAIQQESIFKRLLTPDKDTAFKGVKIVHRHLQNGDVLLLNRQP
TLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNAHFPQNELARSEGYNLANV
SNQYLVPKDGSPLSGLIQDHMIAGMKISVRGRFFNRMDYQQLVYQALAYKTSKIKLLKPA
ILKPVELYSGKQILSTILLNIIPKDMEPLNMTSTTKIPAKAWENATPRKWKAGGTPHKHP
NDMTEAEVVIRQGELLVGVLDKTHYGATAYGLVHCIYELYGGTYAIRLLSCLAKLFTGFL
QREGFTLGVKDILTVAEADEIRTEIIKRSRKIGKETITAALSLPVGTKQEDIVKKIEEQT
ATNPKIRATIDRQYKSALDSYTNDINKACLPAGLITKFPHNNLQLMVQSGAKGSTVNTMQ
ISCLLGQIELEGKRPPVMISGKSLPSFPEFEFSPRAGGFIDGRFMTGIQPQEFFFHCMAG
REGLIDTAVKTSRSGYLQRCLIKHLEGLHVGYDMTVRDSDKSVVQFMYGEDGMEISKAQF
LNEKQLGFLNENKKVLNDKKLIKTLEKDPVVQQVQQHHDKLKAWRETFGNPNVKHKTSAF
PLFTKAVKAKMNLSRDKLMKLWREADDDLKQSFRKQCEPCPDPLNSLYQADSHYGSINER
MEELIDKFNTKNLKKKDKKTFENILKLKTMQSYCSAGEPVGLLAAQSIGEPSTQMTLNTF
HFAGRGDMNVTLGIPRLREILMMASKSIKTPSMEVPFLQVPNLEKRAEELRQILTRVVVS
DVLEYIDVTSTLTIQPQREFTYTVRFNFLPRECYKSEFCVKPKQILKHMRKRFFAEMFTA
IMKYSKIKSNLVMMEEEKKPQNTEDSDDESTDKKSKGQKDEDSSDEEVEDSEDAKMTMKH
EQEREDQEPDVEEREIESDEEEGESKNDLNKKDDEESKIVGAFNYAQNYKEDKKDHLWCE
ITFALPLKFKKLDLTYILKEVASKSVIWETSQIRRAITYMKDDVLTLRTDGINIVEMFKY
NKLLNLNKMYCNDIHKMAETYGIEAAAKIIVKEVKDVFNVYGIKVDPRHLSLIADYMTYN
GTYEPLSRKGMESSASPLQQMSFESSLTFLKAACARGKQDTLQTPSSCLMVGKPCNTGTG
CFTLNYKLPSTLIKS
NT seq 4908 nt   +upstreamnt  +downstreamnt
atggccaaaacgggtcatagatttgatatattacatcctaaacatctgaatccggagaat
ttaacgttttcgatgttcacggcggaggaaatcaagaaattgagcgtcgttgaaatattg
actcctttaatgtttgataccctgggcaatcctgttcctggtggtttatatgataaaaga
ttaggtcctatgagtgaaaaaagtgatccgtgtggtgtatgctataaaaattcatatctg
tgtccaggacattttggtcacatttctttgccattacccttaattaatcctttgtttcat
aaaataattgcgaccattttaaaaatttcttgcttgtcttgttacaaattacaaatttca
ggacatataaaaaaatcgctggtgattaaattaaagttgttgaattgtggtttggtgact
gaagctcaggaagttgataatgtaattacagacctaattaatcaatttgaaaccattgaa
aacattccagaagacaagcttgaatgcattaataaatatgaaactttggttgaaaaatat
tcctctgacaatgattataaaacattcaataacaaaaacgtggaaatgctaaggaatcag
tttgtaaatgggttgttaaaagaagtgaagtccagaaaatcatgcatccattgtaaaact
cccataaatccaatgaaaatattgaagaacaaaataattttaaccacaccaaaactagaa
caatctcatgatgcaaatacctcatcacttgcaagcaaattaaaagtgatggaatccaaa
tatgtgacacctgaagaatcaaaaaggtacatgagacaaatttgggcagaagaagaggag
tttttgggtcatattttgtcagttttgaatggagttaaatgtgaacatcctactgatgtg
ttcttttttgaagtgatccctgtgccaccaactaatgttcgacctgtaaatattgttaat
gataggatcatggagaatccccagactcaaaactacaagcaaattttgtttgatatttta
acattaaagactattatagggtttgtacaaaataaggcggaaaacgtttctgcacaagcc
aaagaattgtacaatgcttgcagaggtgcaacggcgattgaaaagctcaacaattgctgg
gaggagttgcagaacgacgtgaacggtttattggacaaagaaaacgtgcattcgaaggag
ggaaacgggttgaaacaaataatagaaaagaagtcgggagtgattcgtatgcacatgatg
ggaaaacgtgtcaattacgcagcccgatccgtaatcacgcctgatccgaatttgaacatc
gacgagatcggcattccggagacgttcgctaaacacctgacttatccggttcctgtgacg
tcgtggaacgtgcaggagatgcggaagttgattcagaatggaccaaatgttcatcctggg
gccacaatggtggagtttgaggatgggaaaattattaggattaatacttcaaacgccata
caacaagagagtatatttaagaggcttctgactccagataaagacacagcttttaaggga
gttaaaattgtgcacagacatttacaaaacggagacgttttattattgaatcgacaacca
actttacacaagccctcaattatggcacacaaagctcgtatcttaaaaggagagaaaact
ttacgtttgcactatgcaaattgcaaagcttacaatgctgattttgatggggacgaaatg
aatgcccattttccgcaaaacgaattggcaagaagtgaaggatacaatttagcaaatgta
agcaatcaatatttggtacctaaagatggaagtccgttgagcggtctcattcaggatcac
atgattgccggaatgaaaatatcggtcagaggacgatttttcaacagaatggattatcaa
cagctggtttaccaagctctggcgtacaaaacctcaaaaataaaacttttaaagcctgcc
attttaaaacccgtcgagctgtattcgggaaaacaaatactttcaactatacttttaaac
ataataccaaaagatatggagccattaaacatgacgtccaccactaaaatcccagccaaa
gcgtgggaaaacgcgactccgaggaaatggaaggcgggcggaacgccgcacaagcacccg
aacgacatgaccgaagccgaagtggtgatcagacagggcgaattgctggtaggagtgttg
gataaaacgcattacggagcgaccgcctacggtttggtgcactgcatttacgaactgtac
ggcggcacttacgccatcagattgttgagctgtctggccaaattgttcaccggctttttg
caacgcgaaggtttcactctgggagtcaaagatatattgaccgtggcggaggctgacgaa
atacgtacagagatcattaaaagatctaggaaaatcggtaaggaaacgataactgcggcg
ttaagtttaccggtcggcaccaaacaggaggatatcgttaagaaaattgaggaacaaacg
gccacgaatcccaaaataagggccacaatcgacaggcaatacaaaagtgctctggattcc
tacacgaacgacattaacaaggcctgtttaccggccggtttgatcacgaaattcccccac
aacaacctccaactgatggtccaatccggtgcgaagggttccaccgtgaacacgatgcaa
atctcgtgcctactcggccaaatcgagttggagggtaaacgtccgccggtgatgatctcg
ggcaagtccctgcccagctttccggaattcgagttttcgcctcgcgctggcggtttcata
gacggcaggttcatgaccggtatccaaccgcaggagttcttcttccattgcatggcgggg
cgtgaggggttgatcgataccgccgtcaagacgtcgagaagtggttatcttcaaaggtgt
ctgatcaagcatttggaaggtctgcatgtcggttacgacatgactgtgagagacagcgac
aaaagtgtcgtgcagttcatgtatggcgaggacggaatggaaattagcaaggctcagttt
ttaaatgagaaacagttgggatttttgaatgaaaacaaaaaagttttgaatgataaaaaa
ttaattaaaactttagaaaaagatccggttgtgcaacaagtacaacagcaccacgacaag
ttaaaggcatggagggagacgtttggcaatccgaacgtgaaacataaaaccagcgcattt
ccgctcttcaccaaagcggtgaaagctaaaatgaacttaagcagggacaagttgatgaag
ttgtggcgtgaagctgacgatgaccttaaacaatcttttaggaaacaatgtgaaccttgc
ccggacccgttgaattcgttgtaccaggcagacagtcactacgggtccataaacgaacga
atggaagagttgatcgacaaatttaataccaaaaatctgaagaaaaaggataagaaaacg
ttcgagaacattttaaaactgaaaacaatgcaaagctactgttccgctggtgaaccagtc
ggtttattggctgcacaatcaattggagagccctcaactcaaatgacattgaacaccttc
catttcgctggaagaggtgacatgaacgtaactctcggtattcctaggctacgagaaatc
ctaatgatggcatcgaaaagcattaaaactccatccatggaagtacctttcctccaagtt
ccaaatctggagaaaagagctgaagaactacgccaaattttgaccagagttgtggtcagt
gatgttttggagtacattgacgtcacttctacgctcaccattcaaccgcaaagggagttc
acatatacggtgaggttcaatttcctgcctagagaatgttacaagtcggagttctgcgtg
aagcccaagcagatattgaagcacatgcggaaacgtttcttcgccgaaatgttcaccgcc
atcatgaagtattcgaagatcaaatcgaatttggtgatgatggaggaggagaagaaaccg
caaaacacggaggacagcgatgatgaatcaaccgataaaaaatcgaaaggtcaaaaggac
gaggacagttcggatgaagaggtggaggactcggaggacgcgaaaatgaccatgaaacac
gaacaggagcgcgaggatcaagagcccgatgtggaagaacgggaaatcgaaagcgacgaa
gaggaaggcgagagtaaaaacgatttaaacaaaaaagacgacgaagagtctaaaattgtt
ggggcctttaattacgcccaaaactacaaggaggacaaaaaggatcatttgtggtgtgaa
atcacgttcgccttgccgttaaagtttaaaaagctggatttgacctacattctgaaagaa
gttgcttcgaaatcggtgatctgggaaacgtcacaaatcaggcgggcaataacttacatg
aaagatgacgttctgaccctcaggacagacggtataaatatcgtggagatgttcaagtac
aacaaactgttaaatctgaacaaaatgtactgcaacgacattcataaaatggccgagacc
tatgggatagaagcagctgctaaaattatagtaaaagaagttaaggacgtgttcaacgtg
tatggcatcaaagtggatcctagacatttatctttgattgctgattatatgacttacaat
ggtacttacgaacctttgagcagaaaaggaatggaaagtagtgcgtctccgcttcaacag
atgagtttcgagtcttctttgacgttcctaaaagctgcgtgtgccagaggtaaacaagac
actttacaaactccttccagctgtctgatggtgggaaaaccttgtaacacaggaactggt
tgtttcaccttaaactacaagcttccgtcaactttaattaaaagttaa

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