Aethina tumida (small hive beetle): 109607088
Help
Entry
109607088 CDS
T06105
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109607088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atd03041
]
109607088
Spliceosome [BR:
atd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109607088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
PRP4
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_Aladin
ANAPC4_WD40
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD_LRWD1
Beta-prop_SCAP
Ge1_WD40
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_like
Beta-prop_Nup120_160
WDR54
DUF7899
Motif
Other DBs
NCBI-GeneID:
109607088
NCBI-ProteinID:
XP_019879173
LinkDB
All DBs
Position
3:join(23693915..23694074,23694131..23694335,23695029..23695361,23695413..23695595,23695655..23695870,23695944..23696364)
Genome browser
AA seq
505 aa
AA seq
DB search
MSDDDEVQYIKKQKTIHYGSLEDAERARLETDADGDANDENPPTSMPQVHESSEYMELED
AMSRDKQALLEEFERRRKARSINVSTDDAEVKRNLRHLGEPICLFGEGPADRRSRLRDIL
SRIGEDAVIRREAEEERKQYEKDQETTWYHEGPDSLRTARLWIAHYSLPRAKERLEEARR
QIDLPSATKTAKMQEMQKKLQVMSIYCSQIGDTRPISYCQFSPNSKLLATASWTGLCKVW
SVPDCQLKQTLKGHTCNVGAIIFHPKATISQEENVCNMASCAADGSVKLWDFKSEEPIAD
IEGHMPHRVSRLGFHPSGRFLGTCCFDNSWRLWDLEQCTEVLHQEGHVKPVYCISFQVDG
SVCATGGLDSFGRVWDLRTGRCIMFMEGHLKAIFGIDFSPNGYHIATASEDNCCKIWDLR
KRSVLYTIPAHTNLISEVKFQKDGGNYLVTSSYDNTVKLWTTRTWQPLKTLSGHDGKIMS
VDISPDNQYIATSSYDRTFKFWTPE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgacgacgaagtacagtacattaaaaaacaaaaaaccatccactatggctcg
ctggaggatgccgaacgggcccgcctggaaacagacgcggatggcgacgccaatgatgaa
aatccgccgacttccatgccccaagttcacgaatcgagcgaatacatggaacttgaagat
gccatgtcaagggataaacaggccctcttggaggaatttgagagaagacgaaaggccaga
tccataaatgtctccacagatgatgcagaagtaaagaggaatttaaggcacctgggggaa
ccaatttgtttgtttggagaaggtcctgctgacaggaggagcagattacgagatattttg
agcaggataggagaagatgctgttataagaagagaggctgaagaagaaagaaagcagtat
gaaaaagatcaagaaaccacatggtaccatgaaggaccagattcattacggactgccagg
ttgtggattgctcattattcattgccaagagccaaggagcgcttggaagaagctagaaga
cagatagatttgccctcagcaacaaagactgcaaaaatgcaagaaatgcaaaagaaattg
caagttatgtcaatttattgcagtcaaataggagatactagacccatatcatattgtcaa
tttagtcctaattctaaattgttggcaacggcgtcttggacgggtttgtgtaaagtatgg
tctgtaccagattgtcagttgaagcaaactttgaaaggacacacatgcaacgttggagcc
atcatattccatccaaaagctaccataagtcaagaagagaacgtttgtaatatggcatca
tgtgctgctgatgggtctgtaaaattatgggattttaaaagtgaggagccgatcgccgac
attgagggtcacatgccgcatcgggtttcaagactaggatttcatccttctggaagattt
ttaggaacatgctgtttcgacaattcctggcgtctttgggatcttgaacagtgtactgaa
gtgttgcatcaagagggacatgttaaaccagtctactgcatttctttccaagttgatgga
tcagtatgtgccacaggtggtttggattcgtttggaagagtttgggatttgaggacagga
agatgtataatgttcatggagggccacctaaaagcgatattcggtattgatttttcgccg
aacggttaccacatagccactgccagtgaagacaattgttgcaaaatttgggatctgaga
aaaagatccgtactgtataccattcctgcacacactaacttaatatcagaagtcaaattt
caaaaggatggtggcaactatttagtgacttcttcctatgataacactgtcaagttatgg
acaaccagaacatggcaaccattgaaaactttatcaggacatgatggaaaaattatgtct
gtagatatttccccagacaatcaatacatagctacaagttcttatgacaggacattcaaa
ttttggacgccagaataa
DBGET
integrated database retrieval system
