Aethina tumida (small hive beetle): 109607094
Help
Entry
109607094 CDS
T06105
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109607094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atd04131
]
109607094
Membrane trafficking [BR:
atd04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109607094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
ANAPC4_WD40
WD40_CDC20-Fz
zf-RING_2
zf_RING_Vps8
zf-RING_5
zf-RING_Vps41
zf-rbx1
Beta-prop_HPS5
Clathrin
Beta-prop_WDR3_1st
TPR_VPS8_2
zf-C3HC4_2
Beta-prop_WDR36-Utp21_1st
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING_11
T4_Gp59_C
Beta-prop_EML_2
Beta-prop_THOC3
RH_dom
zf-RING_UBOX
zf-UDP
Beta-prop_WDR5
zf-C3HC4_3
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
109607094
NCBI-ProteinID:
XP_019879180
LinkDB
All DBs
Position
2:complement(join(34749953..34750245,34750297..34751353,34751405..34752071,34752122..34752843,34752899..34753217,34753306..34753496,34753551..34753742,34753798..34753863))
Genome browser
AA seq
1168 aa
AA seq
DB search
MGSESDDMIIEDVDESFLNIKEINDVEFDIPPVAPPSLESILWDMESEEGSDSASLHSFQ
SMTTKFRSMLYHCILQGLSSQISSAGERANAGLPTVITNSLKFVAVGTSHGFILAFDSEQ
KLCWCSHDIADQGAVSALAFNLESTRLLVGYERGYISMIDATSGDVIRKLPDAHAPQTAV
LHLRFTFVSNLALCGDSSGCVFILSFNRRLGVRSWDSKCLFSGARGEVCAFEPLVQGYDT
NFLNKNILVAMATMSKVIVISVRPKLKVLFSQQLPRISTSLPLISWQLVSVGKTFQPVLA
WARGSELHYTRVLTYGPNNNKIRLLPLRSVQLPYTLNALHWLGTRHLALLDTSENLRLVE
VRTQRELEMLEVASAGLVYSSAHFKALAVGGGVSEAFALAGERACYNSLSSRGNQLLILG
TKAVHMVKLRTWPERLFYLSEQGRWAEALNLAAEEGTNKEKFTLSLLNNYLESLNQNTVD
LHSLTAAINCCVRLEKIDILCNELLDAVSTDKNNEDWYYTLLTDHICSRLLTILTPAVAQ
TLVSHLEKKDPQTLENILLNLDISCLDLHQVLNLCKKHKLYNAWIHITTKTLGDYTGPLT
EFLGELSPDNHRLGNTILVYVSSCLAGLGYPNGNIPEVAIPRVKHDVLRCLETAHSFNAK
PDEPTYPYLRALLKYNTRECLNVVGLAFTEAEFSGEMGHLQRQRLVQILLKIVIPPEFTD
GQVINLACFITRLVVSNNLQIDDGMMSNLMHLLTETTGNSLSLRDHSEKEQSWLELLNGN
KLTHLNLEQLLKMALESKCYRVAENLYERLGDYSNILDCYLKDEVRKSEIFNYILTHINT
SERLIQEQFMVNFAKLIDVNYKKTSEIVIENYSEYLEQFNEILQSTPDLQYNFIHEIVCS
DLKLPSHIAEQYLIQLCEKDEPSVVKYVQNSTCRPEQALQITRQYQVHAATALLLEQAGE
WMESLEILLEHDLTDDAVGLCIRGAEHLDNQDSQKLWLKLLQEKGQSQTTSLRQLLHAAA
PHVPPAQLLELVSNANFGDVKVLLRGMLSDYTHDVNMLSTTLKLLGKDLHHGLAKALSLG
GRGISVISLICNLCQKSVSVQKELETDRNVVVWGCGHCFHSSCINASESNGLCPQCRMKG
TLLRAVKTKDITFSQVKPHTRPNLEGHF
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggaaagcgacgatatgattatcgaggatgttgatgaatcattcctaaacatt
aaagagatcaatgatgttgagtttgatatacctccagtggctcctccctcattggaaagt
attttgtgggatatggaatcagaggagggcagtgatagtgcctccttgcactcattccaa
agtatgacaaccaaattccggtccatgttataccattgcatcttacaaggtttatcctca
caaatttcatcagctggagaaagggccaatgcaggacttcccacagttataacaaatagt
ttaaaatttgtggctgttggtacttctcatggttttatcttagcatttgattctgagcag
aaactttgttggtgttcacatgatattgctgatcaaggagcagtttcagcacttgctttc
aatcttgaatccacaagacttcttgtgggttatgaaaggggctatatttcgatgatagat
gcgacgagcggtgatgtaatccgaaaacttccagatgcacatgcccctcaaaccgccgtt
ctacaccttagattcacgttcgtgagcaacctggcgctttgcggcgactcctcgggttgc
gtattcatactgtcgtttaaccgacgtctaggcgtgcgtagttgggactcgaaatgtttg
ttttcgggtgcgcgcggcgaagtgtgcgccttcgaacctcttgtgcaaggatatgataca
aattttttgaacaagaacatcctggtggccatggctacaatgtctaaggtgattgtaatt
tcggtacgtcccaaactgaaggtactattcagtcagcaattgcccaggatatctacatcc
ctccccttaatatcgtggcaactagtctcagtaggcaaaacgtttcaacccgtgctggcg
tgggctagaggaagcgaattgcactacactagagttctaacatacggtcccaacaacaac
aaaataagactgctacctttaaggagcgtgcaactcccgtatacactaaatgcattgcac
tggctcggtaccagacacctcgcacttctagacacaagcgagaacctacgtctagtagag
gtgcgcactcagcgtgaactggagatgcttgaggtggcgagtgcaggtttagtatatagt
tccgcccactttaaagctcttgcggttggcggaggggtgagcgaagccttcgccctagcg
ggggaaagggcgtgttataacagtttatctagtcgaggcaatcagttgcttatcttagga
accaaggctgtccacatggtgaagctgcgaacgtggccggagaggttgttttatcttagc
gaacagggacgatgggcggaggctttaaacttggctgccgaggaggggacgaacaaagaa
aagtttacgttgtcgctccttaataattatttggaaagtttgaatcagaacacggtcgat
ctgcacagtttgactgccgccatcaattgttgtgtcagattagaaaaaatcgatatactc
tgcaatgagttactggatgcagtttcaacagacaaaaacaatgaagactggtactacaca
ttactgactgatcacatttgcagcagactgttgaccatattaacaccagcagttgcccag
accttagttagccacttggaaaaaaaagaccctcaaacattagaaaacattctcctcaat
ttggatatcagttgtctagatcttcatcaagtactaaatctttgtaaaaaacataaactt
tacaatgcctggattcatatcaccacgaaaactttaggcgactacaccggaccactgact
gaatttttaggcgaactgagcccggataatcatcgactcggcaacaccattttagtctac
gtttcttcatgtttagcaggtttgggttatcccaatgggaacataccggaagttgctata
ccaagagtcaagcacgacgttctgagatgtttggagactgcccattcatttaacgccaag
ccggacgaaccgacgtatccgtatttaagagctctgttaaaatataataccagagagtgt
ttgaatgttgttggtttagcatttacagaagccgagttttcgggggaaatgggacatttg
caaaggcaaagattggtgcagatacttttgaaaattgtcataccacctgaatttactgac
ggtcaagttataaatttggcttgttttattactcgcctggtagtatcaaataatctacaa
attgatgatggaatgatgagcaatttgatgcatttgttaacagaaaccacaggtaattct
ctatcgttacgcgatcattctgaaaaggaacaatcatggcttgaactactaaacggcaat
aaattgacccatttgaatttagaacaacttcttaaaatggcactagagtcaaaatgttat
agagtggcggaaaatttgtatgaacgactaggagattatagcaatattttagactgttat
ttaaaagacgaagtgcgtaaatcagaaatatttaactacatcctaactcacataaataca
agtgaacgcttaatccaagaacaatttatggtaaacttcgccaaattaatcgatgttaac
tacaaaaagaccagcgaaatagtgatagaaaactattcggaatatttagagcagttcaat
gaaatcttacaatccactcccgatttacaatacaattttatacacgaaatagtctgcagt
gacctaaaactaccctcccacatcgccgagcaatacttgatccaactgtgcgaaaaagat
gaaccttcagttgtaaaatacgtacagaacagtacatgcaggccggaacaagctcttcaa
atcactcggcaataccaagtccacgcggcaaccgcactacttttggaacaagcgggagaa
tggatggaatcattggaaatcctcctcgaacacgatctgaccgacgatgcagtcggcctt
tgcattagaggagcggaacacttggacaaccaagattctcaaaaactgtggctgaaactg
ctgcaggaaaagggccaatcccagaccacatctttgaggcaactactgcacgctgcggct
ccccatgtgccgccagcgcaacttctcgaactcgtttccaatgccaattttggagatgtc
aaggttttgctgagggggatgctaagcgattacacccacgatgtaaatatgttgtccacg
accctgaaattgttggggaaggacttgcaccatggtttagcaaaggcgttgtcattaggt
ggtcggggaatttccgtgatctctttaatatgtaatctgtgtcagaaatcagtttcagtt
caaaaggaactggagactgatagaaacgttgtagtttggggttgtggtcattgtttccat
tccagttgtataaatgcatctgagtcaaatggtttatgtcctcaatgtcgaatgaaagga
acattgttgagagcagtgaaaaccaaagatattacctttagtcaagtgaaaccacatacc
agacctaatttagaaggtcatttttaa
DBGET
integrated database retrieval system
