Aethina tumida (small hive beetle): 109607156
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Entry
109607156 CDS
T06105
Name
(RefSeq) splicing factor 3B subunit 3-like isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109607156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atd03021
]
109607156
03041 Spliceosome [BR:
atd03041
]
109607156
03036 Chromosome and associated proteins [BR:
atd03036
]
109607156
Transcription machinery [BR:
atd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109607156
Spliceosome [BR:
atd03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
109607156
Complex B
109607156
Complex C
U2 SnRNP specific factors
109607156
Chromosome and associated proteins [BR:
atd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
109607156
TFTC complex
109607156
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_LRRK2
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
109607156
NCBI-ProteinID:
XP_019879238
LinkDB
All DBs
Position
2:join(8211029..8212095,8212822..8213156,8213494..8213645,8213862..8214014,8214443..8215690,8215858..8216418,8216477..8216617)
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AA seq
1218 aa
AA seq
DB search
MHLYNLTLQRATAISHAVHGNFSGTKTQEIVISRGKSIELLRPDPNTGKVHTLLTVEIFG
IVRSLMSFRLTGGTKDYVVIGSDSGRIVILEYLPAKNMFEKVHQETFGKSGGRRIVPGQY
LATDPRGRAVMVGAIEKQKLAYILNRDAQARLTISSPLEAHKSNTLVYHMVGVDVGYDNP
MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGVNHVVRKYSEPLEEHANFLVTVPG
GDDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETEDDMVTEIKLKYFDTVPVATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDELEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMESLSPILSSRVADLAGEDT
PQLYMLCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRSDDEYDAYIIVSFKN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALNDDALVQVYPDGIRHICSDKRVNEWKAGK
KTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLHEYKERKRMNSDVVCMALANVPQGEQR
SWFLAVGLADSTVRIISLDPSDCLAPRSMQPLPVCAESLCIVEMGCTDRDPDNAAAASTT
STLYLNIGLQNGALLRTVLDPVTGDLTDTRTRYLGSRPVKLFRIRMQQSEAVLAMSSRSW
LSYYYQSRFYLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LKYTPRKFIIHPESNNIIVIESEHNAYTEETKKQRRLQMAEEMKEAANEEEQELAKEMAE
AFLSEDLPESIFSSPKAGHSMWASTLRMMDPVQGITHNMISLEQNEAAMSICLVKFHGQP
EHQWFLIVGVAKDFQLNPRQCSSGFLDTYKVDVMGRELKLVHRTPVDEVPMALCSYNGRL
LAGVGRMLRLYDMGKKKLLRKCENKHIPNAIVNIQAMGKRIFVSDVQESVFMVRYKRAEN
QLIIFADDTHPRWITCTNVLDYDTVATADKFGNIAILRLPPNVSDDVEEDPTGHKALWDR
GLLNGASQKADTIATFHVGETVTWLQKATLIPGGWESLIYTTLSGTVGVLVPFTSHEDHD
FFQHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQYNSLEPAKQKSIAADLDR
TPAEVSKKLEDIRTRYAF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgtacaatttgacccttcaaagggccacggcgatctcccacgccgtgcacggc
aacttttccgggacgaaaacccaggaaatcgtcatatcacgtggcaaaagcatagaactg
ttgagacccgacccaaacaccggcaaagtgcacacactacttacggtcgaaattttcggc
atcgtaaggtcactgatgtcattcagattaacaggcggcacaaaagattacgtcgtcatc
ggttcggattccggcaggatagtaattctggagtacttgccggccaaaaacatgttcgag
aaagtccatcaggaaaccttcggcaaatcgggcggaagaaggatcgtgcccgggcagtat
ttggctacggatcccagaggcagggctgtgatggtcggcgcaattgagaaacaaaagctg
gcgtacatccttaacagggatgcccaggccagactgaccatctcctcgcctcttgaggct
cacaaaagtaacacgttagtgtatcacatggtcggcgttgatgtggggtatgacaacccc
atgtttgcctgtctggaaattgattacgaggaggcagactcggatccaacaggtgaggct
gcacaaaaaactcaacagacacttacgttctatgagttggatcttggagttaaccacgtg
gttaggaagtactctgagcctttggaagaacatgccaatttcttagtcacagtgcctggt
ggtgatgatggaccatcaggagtactgatttgttctgaaaactatctcacttacaaaaac
ctcggtgaccaacatgacattcgttgtcccattccgaggaggcgtaatgatctggatgat
ccagaaagaggaatgatttttgtttgctcagccacccacaaaacaaagtccatgttcttc
ttccttgcccaaactgaacaaggagatatattcaaaattacgttggagactgaagacgat
atggtcaccgaaattaaattgaaatactttgacacagtcccagtggcgactgccatgtgt
gtcctcaagactggatttttattcgttgcttcagaatttggtaaccattatttatatcaa
atagcccacctcggtgacgacgacgacgagctggagttcagttcggcgatgcccctggaa
gaaggcgacacgttcttcttcgcaccgaggccgctgcgtaatctggtcctggtcgacgag
atggagtcgttgtcgccgatattgtcgtcgcgggtcgccgacttggctggcgaggacacg
ccccagttgtacatgctgtgcggcagaggtccaaggtcgtcgctgcgcgtgctcagacac
ggtctcgaggtctccgagatggccgtgtcggaattgcccggcaacccgaacgccgtgtgg
accgtgaaacggagaagcgatgatgagtatgacgcctacattattgtgtcattcaaaaat
gccacgttggttttatctattggagaaactgtggaagaagtaacagacagtggtttctta
ggaaccacacctactttatcctgttcagctttaaatgatgatgcccttgtacaggtatat
cctgatggaataagacacatatgttctgataaacgtgttaacgaatggaaagctggaaag
aaaactatagtaaaatgtgctgtgaaccaaagacaagttgtgattgctctaactggggga
gaactagtttattttgagatggatcctactggccagttacacgagtacaaagaacgaaaa
agaatgaattcggacgtggtgtgcatggcactggcaaacgtgccccagggtgaacaacga
tcatggtttttggcggtcggattagcggacagtaccgtgaggattatatccctggatcca
agtgactgtttggcgcctagatcgatgcaaccgttgccggtgtgtgccgaatcgttgtgc
attgtagaaatgggatgcaccgacagagatcccgacaacgctgccgccgccagtaccaca
agtaccctatatttgaacattggtcttcagaatggtgccctattgaggacagtattagat
cctgttactggagacttaactgatacaagaaccaggtatcttggttctagacctgttaag
ctgtttaggatacgaatgcaacaatctgaggccgttttggcaatgagcagccgatcctgg
cttagctactactatcaaagtcgcttctatttgacgcctctttcttatgaaagtctcgaa
tatgcatccggctttagttcggaacagtgccctgagggaattgttgcgatttcaaccaac
accctcaggattttggccttggaaaaattgggcgccgtttttaaccaagtatcgttcccc
ctcaaatatacacctaggaagttcatcattcatccagagtccaacaatatcattgtcata
gagtctgaacacaacgcctacactgaagaaacgaagaagcaaaggcgacttcagatggcc
gaagaaatgaaagaagccgccaatgaagaagaacaagaactggcgaaagaaatggccgaa
gcctttttaagtgaagaccttcctgaaagcatattttcctcaccaaaggctggccacagt
atgtgggcttcaacgttgaggatgatggatccagtacaggggataacgcataacatgatt
agtttagaacaaaacgaggcggccatgtctatttgtctggttaagttccatgggcaacct
gaacatcaatggtttttgattgttggagtggcaaaagacttccaattgaatcccagacaa
tgttcctcagggttccttgacacatacaaagttgacgtaatgggtagggaattgaagctg
gttcacaggacgcctgtagatgaagtgccaatggctctttgttcatacaatggaagactg
ttggctggagtaggaagaatgttaaggctctatgatatgggcaagaagaaactgctaagg
aaatgtgaaaacaagcatatccccaatgcaattgtcaacatccaagccatgggtaaacgt
attttcgtctccgacgttcaggagtccgtcttcatggtcagatacaaaagagcagagaat
cagttgattatttttgctgatgacacacacccaagatggattacgtgtaccaacgtcttg
gattacgacacagtcgccacggcagacaaattcggaaacatcgccatcttacgtttgcct
cccaatgttagtgatgatgtggaggaagaccccactggtcacaaagccttatgggacagg
gggttgcttaatggggcgtcccaaaaagccgatactattgctacattccacgtgggagag
actgtaacttggttgcagaaagcaacgttaattcctggaggatgggagtctttaatctac
accacactttcgggaacagtaggggtattggtacccttcacatctcacgaagaccacgat
ttcttccagcacttagaaatgcacatgaggagcgaaaattcaccgctctgtgggagggat
catttatcatttaggagttattattatccagtaaagaatgtaattgatggagatctttgt
gaacagtataactcgctggaaccagcgaaacaaaaaagtattgcggctgatttagacagg
acgccagcagaagtttccaagaaacttgaggatatcagaaccagatacgctttctaa
DBGET
integrated database retrieval system
