Aethina tumida (small hive beetle): 109607666
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Entry
109607666 CDS
T06105
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X2
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109607666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atd03021
]
109607666
Transcription machinery [BR:
atd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
109607666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF3874
Motif
Other DBs
NCBI-GeneID:
109607666
NCBI-ProteinID:
XP_019879698
LinkDB
All DBs
Position
3:complement(join(31899478..31899682,31899740..31899962,31900020..31900370,31900424..31900543,31900605..31900795,31900849..31901085,31901196..31901368,31901423..31901470))
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AA seq
515 aa
AA seq
DB search
MSSSSMTSTSSGSQSKPATVQEFGIRVPKNVAKRYHVMRFNGTLDVDFEKWTQVKMEREN
NMKEYKGVDEDQPKFGAGSEFGREAKEEARRKKLGIVARKYRADDQPWILKSYGSTVKKF
KGIREGGVSENTAYYVFTHAEDGAIEAFPLHEWYKFQPIQRYKALSAEEAEEEFNKRNKH
LNYFSLMLRKRLKGDEDTELEEGEEKAKKGSSKKDKELKISEMDEWMESSENDSEDEEKN
EEDDEENDKKKKKNKKVDPKKGKKKRDTDVEAFEESDDGDGEGRELDYISDSSESEPENT
NLESVAEEKALRKLLTSDEDSENDSEKSDKEQSNDDEENKEKEGEKKEDKPDGDKKKKNK
KKVKKEEKKELKKDDDDPFSSDSSTDEDVKKKKTDKKGKKEEKETGSANNSRAATPTDNK
RKLINDTLAGPSVKKPKLELANYIPGSIESGITEDAVRKYLMRKPMTTTELLQKFKSKKT
GLSSEQLVNIMTQILKKINPVKQTLKGKMYLSIKA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcatcaatgacaagcacaagttctggttcccagtcaaagccagccacggtt
caggaatttggtattcgtgtaccgaaaaatgtcgccaaacggtatcatgttatgcgattc
aatggcaccctggacgtggattttgaaaaatggacacaagttaaaatggaacgagagaac
aacatgaaagaatacaaaggcgttgatgaagaccagcccaagtttggtgctggttcagag
tttggcagagaagctaaagaagaagctagacgaaaaaaactgggtatagtagcaagaaaa
tatagggcagatgatcaaccatggatattaaagtcatatggtagtacagttaagaagttt
aaagggattcgagagggtggtgtttcagaaaatacagcatattatgtcttcacacatgct
gaagatggagcaattgaagcttttcccttacatgaatggtataaattccaacctatacag
agatataaagctttgtcagctgaagaagctgaagaagagttcaataagcgcaacaagcat
ttgaattacttctctctcatgttgaggaagaggcttaaaggtgatgaggatactgaattg
gaggagggagaagaaaaagccaagaagggatcatcaaagaaggataaagaattgaagata
tctgaaatggatgaatggatggagagttcagaaaatgattctgaagatgaggaaaaaaat
gaggaggatgatgaagaaaatgataagaagaaaaagaagaataagaaagttgatccaaag
aagggaaagaagaagcgtgatactgatgtggaggcttttgaagaatctgatgatggtgat
ggagaagggagggaattagattatattagtgacagtagtgagagtgaacctgagaataca
aatttggaaagtgtggctgaagaaaaagctttacgtaaactacttacatcagatgaagat
tctgagaatgattctgaaaaatctgacaaagaacaaagtaatgatgatgaagaaaacaag
gaaaaggaaggggaaaagaaggaggacaaacctgatggtgataaaaaaaagaagaacaag
aaaaaggttaagaaagaggagaaaaaggaacttaagaaagatgatgatgatccatttagt
tcagatagtagcacagatgaagatgttaaaaagaaaaaaactgataagaaaggtaaaaaa
gaagaaaaagaaactggaagtgcgaataattcccgtgctgcaacaccgactgataataag
aggaaattgattaatgatacattggctggtccatctgtaaagaaaccaaagcttgagctt
gcaaattacatccctggatcaattgaatctggtattactgaagatgctgtgcggaaatat
ctgatgcgtaagccaatgaccacaactgagttattacagaagttcaaatctaagaaaact
ggcttatctagtgagcaattggtcaatataatgacacaaattttgaaaaaaatcaatcct
gtaaaacaaactctcaaggggaaaatgtatttatccatcaaagcataa
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