Aethina tumida (small hive beetle): 109608503
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Entry
109608503 CDS
T06105
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03013
Nucleocytoplasmic transport
atd03015
mRNA surveillance pathway
atd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109608503
09122 Translation
03013 Nucleocytoplasmic transport
109608503
03015 mRNA surveillance pathway
109608503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109608503
03041 Spliceosome [BR:
atd03041
]
109608503
03009 Ribosome biogenesis [BR:
atd03009
]
109608503
03012 Translation factors [BR:
atd03012
]
109608503
Enzymes [BR:
atd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109608503
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109608503
mRNA cycle factors
Stress granule specific factors
109608503
Spliceosome [BR:
atd03041
]
Complex C
Other components
EJC/TREX
109608503
Ribosome biogenesis [BR:
atd03009
]
Eukaryotic type
90S particles
Helicases
109608503
Translation factors [BR:
atd03012
]
Eukaryotic type
Initiation factors
eIF-4
109608503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Cas3-like_C_2
TniB
UvrD-helicase
Utp25_C
Motif
Other DBs
NCBI-GeneID:
109608503
NCBI-ProteinID:
XP_019880500
LinkDB
All DBs
Position
1:join(58930628..58930763,58932022..58932357,58932415..58932637,58932701..58933208)
Genome browser
AA seq
400 aa
AA seq
DB search
MAKGKSAAFEDLSNVEFETSEDVEVIDKFKHMHLREELVRGIFAYGFERPSAIQQRAIKP
IMKGRDVIAQAQSGTGKTATFSIAILQQLDLTMRETQVLCLSPTRELAVQIQKVILALGD
FMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIRRRALRTRSVKMLVLDEADE
MLNKGFKEQIYDVYRFLPPSTQVVLISATLPHEILEITSKFMTDPIRILVKRDELTLEGI
KQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRESNFTVSSMHGDM
PQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRF
GRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagggaaagagtgcggctttcgaggatttatcgaatgtggaattcgaaaccagc
gaagatgtggaggttatcgataaatttaagcatatgcacttaagggaagagctcgtcaga
ggaatattcgcatatggcttcgaaaggccctctgcaatccagcaaagggcaatcaaacca
atcatgaagggcagagatgtaatagcacaggcacagtctggtactggtaaaacagccacc
ttctccattgcaattttgcaacagctcgacttgacaatgcgtgaaactcaggttttgtgc
ttgtcgccgaccagagaacttgccgttcagatccagaaagttatcctcgctctcggtgac
ttcatgaatgtgcagtgccacgcctgtattggcgggacaaatttgggtgaggacatcagg
aaactggattatggtcagcatgttgtgagtggaactcctggaagagtctacgatatgatt
cgcagacgagcacttaggacgaggtccgttaaaatgctcgtactagatgaagccgatgaa
atgttgaacaaaggtttcaaggagcaaatatacgatgtgtacagatttttgccaccatct
acgcaggtggtgctcatttccgctacgcttcctcacgaaattttggaaattacgtctaaa
ttcatgacggatcccattaggattttggtaaaacgtgatgagttaactttggaaggaatc
aaacagttcttcgtcgcggtggagcgtgaggaatggaagtttgatacgttgtgcgatctg
tacgacacattgactatcactcaggcggtgattttctgtaacacaaagaggaaggttgac
tggcttaccgagaaaatgcgcgaaagcaattttaccgttagttccatgcatggtgatatg
ccacaaaaagaaagagataacattatgaaggagtttagatctggacaaagcagagtactt
attaccacagatgtatgggctagaggcattgatgtgcagcaagtcagtttggtcatcaat
tatgatttgcccaacaaccgtgagttgtacattcacaggatcggtagatctggtcgtttt
ggtcgcaaaggtgttgccatcaacttcgtaaagtctgatgatattaggattttaagagat
attgagcagtactattcaacacagatagatgaaatgccaatgaatgtggctgacttaatt
taa
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