Aethina tumida (small hive beetle): 109608811
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Entry
109608811 CDS
T06105
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109608811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atd03021
]
109608811
03036 Chromosome and associated proteins [BR:
atd03036
]
109608811
Transcription machinery [BR:
atd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109608811
Coactivators
SAGA/TFTC/STAGA complex
109608811
Chromosome and associated proteins [BR:
atd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109608811
STAGA complex
109608811
TFTC complex
109608811
SAGA complex
109608811
SLIK complex
109608811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_HPS5
WDR90_beta-prop_4th
TFIID_NTD2
Beta-prop_SCAP
Beta-prop_WDR19_1st
WD40_like
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD40_RFWD3
VPS8_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
109608811
NCBI-ProteinID:
XP_019880920
LinkDB
All DBs
Position
1:11376885..11378495
Genome browser
AA seq
536 aa
AA seq
DB search
MDVRDFFRWKRQIEVQNVISTYLHRRNYPSVCPLEVSGTELLTHSAVESGASRPNSILYS
CCNSDPIVIDQNFSKFISWLKELTKQKNNHYDIEYIVGPLFCHLYLDILHGGNSERAAAF
FKCHLPSVDKLKCDIVVKDLISSLASDKDTSILQRFRSNKYLVDLYKESYLLLRKFVGEN
CHVVFLEVLQTYFEIKVVEEVQNETGEEQINSKRKMNDVHVNSSRLSNIIKQLNSESSPI
FNINISNTKQLISSGLMKRQSGLMAFAENNHVILKPIHSFDSILNNKEYGDIKLTGHSGH
VYTMDLANNNTFLCTGSSDTKLCIYDVTNFNISHICNGHVGPIYCTKISTNGEYVVSGSQ
DTTARLWSTKTGKPIRVFVGHTQSITSIDFHPNSLYIATGSADKNVRLWSVENGNPLRLF
SGAKGTIYSVMFNPKGHCLATSSEDKRIRIWDLVTSKLLVELQCYHEPVLKLLWSTDGKL
LCGGSCNGIIYIWDFGKMEENLEESFYDPITTKYINNRLIGLEYAFGTFGALTTTS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacgtgacttcttcagatggaaacgtcaaattgaagtgcaaaatgtaatatca
acatatctgcacaggaggaattatccatctgtttgccctctggaagtgtccggtacggaa
ttactgacgcattccgcagtggagagtggagcctcacgtccaaattcaattttatacagc
tgctgtaacagtgacccgattgtgatagaccagaatttcagtaagttcatatcatggctg
aaagaactcacaaaacagaaaaacaatcattatgacatagaatacatagtggggccttta
ttttgtcatctgtacctggacattctacatggaggaaattctgaacgagctgctgctttc
ttcaaatgccacctaccttctgtagacaagttaaaatgtgatatagttgttaaagattta
ataagcagtttagccagcgacaaagatacgtcaattctacagagatttagatcaaataag
tacctagtggacctttacaaggagtcatatctacttttaaggaagtttgtaggtgaaaat
tgccatgtcgtattcctggaagttttacagacttactttgaaattaaagtggtggaagaa
gtgcaaaatgaaaccggtgaagaacaaatcaattccaaaaggaaaatgaatgatgtacat
gtaaattctagtagacttagtaatataataaaacaattaaacagtgaatctagcccaata
ttcaatattaacataagcaatacaaaacagctaataagtagtggattaatgaaaagacaa
tctggattgatggcttttgctgaaaacaatcacgtcattctgaagcctatacatagtttt
gatagtatactaaataacaaagaatatggtgatattaagctaactggtcactcaggtcat
gtatataccatggatttagcaaataataatacttttttatgcactggttcttcagacaca
aagttatgtatatatgatgtaacaaattttaacattagtcatatttgcaatgggcatgtg
ggccccatttactgcacaaaaattagtacaaatggtgaatatgtagtctctgggtctcaa
gatacaactgccagattgtggagcaccaaaacaggaaagcctataagggtttttgttggt
cacacacaatcgattacctcaatagatttccatccaaacagtttatacatcgccaccggc
tcggccgacaaaaacgtaaggttgtggagtgtggaaaacggaaatccattgagactgttc
agtggtgccaaaggtacaatatactcagtaatgttcaaccctaaaggacattgcctagct
acatccagtgaagacaaacggattcgaatttgggacctagttacttcgaagttattggta
gaattacaatgctatcacgaaccagttctgaaattgttgtggagtacagatggaaagcta
ctgtgtggaggctcctgtaatggcatcatttacatctgggactttggcaaaatggaagag
aatctagaagaaagcttttacgatccaattacaacaaaatatattaataatcgactaata
ggactagaatatgccttcggtacctttggggcacttacaaccacctcttaa
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