Aethina tumida (small hive beetle): 109609156
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Entry
109609156 CDS
T06105
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109609156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109609156
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109609156
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
109609156
NCBI-ProteinID:
XP_019881336
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All DBs
Position
1:complement(join(44947866..44948186,44948242..44948363,44948419..44948532,44948585..44948657))
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AA seq
209 aa
AA seq
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MEKKPFNYSIGYLTRPDGCVVFSKRGTTVIAGVYGPVEIKYNKMVIDKAVVECHLRHKMG
IPGVAQKFVDMIIKNICESSLMASLYPRTTVTITIQELENKGHLISNAVNAACLACLKSG
IDMKYMFAAATCFLIGETLSFLPPDEKSSSQATFVFVFNNVDNKIIASHTEGQYSEEIYM
QALNMCLIEAKNIFKFFKQIIIEEIQNKK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaaccatttaactattcaataggatatttgaccaggcctgatggctgtgtt
gtttttagtaaaagaggaaccactgtaatagctggggtctatggcccggtggagattaaa
tacaataaaatggtcattgacaaggctgttgtagaatgccacttaagacataaaatgggt
attccaggtgttgcacaaaaatttgttgatatgatcataaaaaatatatgtgaatcctca
ctgatggcatcattatatcctcgaactactgttactataaccatacaagaactagaaaat
aagggtcatttaatttcaaatgcagttaatgctgcctgtttagcttgtttaaagtctgga
atagacatgaagtatatgtttgctgcagctacctgcttcttgattggtgaaaccttaagt
tttctgccacctgatgaaaagtcaagttcacaggccacttttgtatttgtcttcaataat
gtggacaacaaaattattgcttctcacactgaaggacaatattcagaagaaatatatatg
caagcactaaatatgtgtttgattgaagcaaaaaatattttcaaattttttaaacagatt
ataattgaggagatacaaaataaaaaataa
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