Aethina tumida (small hive beetle): 109609550
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Entry
109609550 CDS
T06105
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109609550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109609550
03041 Spliceosome [BR:
atd03041
]
109609550
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109609550
Spliceosome [BR:
atd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109609550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
NBCH_WD40
WD40_like
PQQ_3
EIF3I
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_LRRK2
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
109609550
NCBI-ProteinID:
XP_019881792
LinkDB
All DBs
Position
5:complement(join(28430774..28431094,28431144..28431306,28431359..28431745,28431800..28431900))
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AA seq
323 aa
AA seq
DB search
MHKNIYNTIFCQTFSPCGNLLTAGDIYGSIHVFFLNKILNSDNNLNKEELLPKFKISVKE
DYPINALLTTHDHLIVGTVGEIVAFTWRNVKTNKNIRDWSIELPENKDGFNKTDVNCLIY
HEENRHLYVGCGDNAVYVYDIETRDLLKTLDKHKDYIHSICLINNELISGGEDGVVNIWD
IRTNQVVNKITPSLENKISRPNLGKWIGAVSANDDYILCGGGPRLALWHFRFLSHSTIFP
IDDNGIHIAEIYDEKILAGGRSKLFYQMNFVGDIVSEIPTSAGTTYSAIHHSEPNNVLCI
AGSSPKIDICNNFMYKNQQLSLC
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaaatatatataatacaattttctgccaaaccttcagtccctgtggcaactta
ttaacagcaggagacatttatggttcaatacatgtattttttttgaacaaaatcctaaat
tcagataacaatttaaacaaagaagaactattaccaaaatttaaaatatctgtaaaagaa
gattatccaattaatgctcttcttactacacatgatcatttaattgttggtacagttggt
gaaattgttgcttttacctggaggaatgttaaaacaaacaaaaatattcgtgattggagt
atagaattaccagaaaataaagatggtttcaataaaactgatgttaactgtttgatatat
catgaagaaaacagacatctttatgtgggatgtggtgataatgcagtttatgtgtatgat
attgaaacaagagatttattaaaaacactagacaaacacaaagattacattcacagcata
tgtcttataaataatgaattgatatcaggaggggaagatggggttgtcaacatttgggat
ataagaaccaatcaggtggtaaataaaattacccccagtttagagaataaaatttctagg
ccaaatttaggaaaatggattggagcagtcagtgcaaatgatgactatattctctgtgga
ggaggtcctagactggctctgtggcactttcgctttttatctcactctacaatatttcca
attgatgacaatggcattcatattgctgaaatttatgacgaaaaaattctagctgggggg
agaagtaaacttttttatcaaatgaattttgtgggtgacattgtctcagaaattcctact
tcagctggtactacttatagtgccatacatcatagtgagcccaacaatgtgttgtgtatt
gcaggctcaagtcctaaaatagatatttgtaataatttcatgtacaaaaatcaacaattg
tctttgtgttga
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