Caldicellulosiruptor bescii: Athe_0012 Help Entry Athe_0012         CDS       T00857                                  Name (GenBank) YD repeat protein Organism ate  Caldicellulosiruptor bescii SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RHS_repeat SLH VWA VWA_2 TSP3_bac SH3_3 DUF6531 VWA_CoxE VWA_3 fn3 Beta-prop_EML_2 Vgb_lyase Ig_J_second Tfb4 Motif Other DBs NCBI-ProteinID:  ACM59178 UniProt:  B9ML47 LinkDB All DBs Position 12644..21727 Genome browser AA seq 3027 aa AA seqDB search MRFPKKLRVLLTFLILLIFTLNTNLYVFSQSSNLKNQESNYKDLIGHWAEDEFRWLIEKG IISGVKANGVMLAKPDEKLTRAEAVVIILRTIFEKELLEEEIKKLKEDSFKDISNHWSRD YINVAARYGLVKGYSDKTFRPNQRITREEFVLMVIRVSKYREQAASEGKQNDKKVKFKDV SVNNFGYNEIIFAVEKGLIKGYSDGTFRPRSYISRAEAAVIVARALKADLFITYRAKKPQ ITKENASEFFELVVDKEEVGIIEKAKLTLKSKVKGVKFTAEWKASGGKLEVAKDNQSAIW SPTDAEEGKNYIVTVEVTILTDNGEKIKIQKVARIRVNEGVQLTKNENIEEPVNKIDPLF TQRESNNLVQENSSYSPLEEKLSAPILKIAKKGEYVELTWNEVKGARSYIVKRGKVSGEY EVLASGVITTAYIDGPMDGKTTYYYVVAAVGANGTTSMNSNEVVYKALPQSPKLFGTYNG TSARLTWTKANGAERYTLYRSTVSGGPYYAIAENLLTNVFEDTNLTSGTVYYYVVKAINE LGESEYSNEVAMGEGVTVAAKFNPDDDEDGDGLTNVDELKYATSLKKNDSDGDGLSDGYE VKKGTNPLVPDTDNDGIYDGAEVVMGTDPLTKNPLTSAEKYAVSEDGKVFVRALSDANIL IAPLQVKRSDNVFINSLKGIVGKAIEITAGGFDIKKAEIVVNYDEAELNGVEENNLMLYY VNYDKKILEPLEDVVVDTVYNRVSGKTEHFSTFLLGDKNMPVDLSKVDIVFVLDNSGSMS SNDPNYYRIEATKKFIQNIDELNNRVGLVDFDSSVSVRSNLTSDKSKLLQALNAMRWTGG STNIGGGLKAALGLFDQEQSKKIIVLLSDGYHNTGIHPNDVLPELIKQEIVVNTIALGKD CDRELLHDIADKTKGGYFYVDNTGGLSQEDVDKQIELIYEKLTKWITLQKEAEKNLKPQE VLSIEYNDVGLDNEEFHKWITTAMTNLLTGNYMEEFDDISIEGNGPEFKFVRYYNSFANQ QKTIIGKGFRTNFDSKLTKVAGVGIVQAGVLNVREGPNVNTKKIGYLTKGTKVQIEEDGN KNGSGWHRIVYKGKSAYICAAYVKELNNGIEVTYPSGSMIVFVDDNGDGIYLSDSNKADK VVLSGNEYILIQRDLTRYVFDKSGKLIKIGDRNENYITIEYSGEKISAARDVFGRKLEFI FQGDNLVCIRENIKGKIGRKVEFVYDDKDRLIKVIGVDGAETRYEYDEKDRLKRIIDANG HQVVRNEYDILGRIVRQYDGEDIIRFFIYDDEDRVRYYIDENGNESMVVFNEELKPIKER NALGGGCDYKYEINDGSKWIDVTTPDLDKDVVVSGLTREKYQELKEKGSMTKQVTIQIIK TSPSLETAKTTQIYDGRGNIIQVIDAYGNSIKMKYDNNNNLIEQTDRIGATTKYIYDAEG INLIEKIDPLGNKERYEYYSINSGIKLNGLLAKYIDKNGNETRYYYEDEYNNLTRVVDAE GYETKYEYDQLGRKIKEINERGYVTRFEYDPEGRITKEIDAFGKTKVYVYDKVGNLIEEI DRLGNKTRYVYDDKNRLIKEIDAMGGEYQYFYDPVGNKIKEIDPEGRVTKYTYDELNRLV EIEDAEGNKTKFKYDLAGRKISEVNALGKETRYEYDLLGRLTKVIDPLGKTRSYQYNAEG YKISETNKNGATTSYVYDLAGRLITAYYPDGTRRSYNYDNNGNVISIINPKGYVTKYYYD KLNRVIKVEDSNGKAVTYEYDGCGNVICFKDKKGRETRYEYDALDRVKRVIAPNGAQTEY EYDAEGRVVKVTDAKGRSEEYMYDELGRVVVYKDKLGNVIKYAYDKVGNRTQLIDRRGNA TKYEYDKLNRVVKVIDAYGNESRLEYDAVGNNIAKTDRRGNTTKYEYDANNRLVTIIDPY GNKIRFEYDGEGNVICRIDARGNRMYYSYDGLNRLRTVQDNDGRKTVYEYDENGNIVKII RPDGKYVTYRYDSLDRLVRVTQENGAVTEYRYDEEDNLIEVKDGNGNITRYEYNEIDRPV KVIDAIGNEERYSYDLVGNIVYAIDKNGVRIEYSYDQLDRVVHVKAGGVEVRYSYDEEGN RVQMSDKTGINKYEYDKLNRLIRKIYPDGKSIEYEYDQEGNVIKVKDPSGYVTQYKYDKM NRLEEVITSDGSTRYSYDENGNVKSIEYPNKLKFEYEYDSRNLLKGLVVTARDVVRNEID KYYTPSSVIEQGGGTSTYIYKYEYGYDDNGNMIYKQEPIGRTEYKYDEVGRVAEVKDRFG RLTRYEYDNVGNRIKEIVEVPTGISRDSLNSEGLNIRYDYGEVYSVEKTYTYDKLNRLLS IESRDREGNIVGVNSYGYDNNGNLIRAEERWRTRVYKGQGSKVVAKEIEKQDLQTVYQDA YTAENVQVQTSVYNSAYSLDNSTVVISVYDSVYNSAYNLQNSSSEQSITVKDVVYETVYE DVYEIEEKIKVSEFRYDELGRMVWAKVDNNVVEFEYDGDGLRTKKITANDVKTYYWSGSN LIYESDATGKGFSSIWGLSMIGRTDGSNTEYFMKDGHGDVLITFDKSGQRKNIYEYDLYG NVIKEIETGQENPIRYAGYYYDKELEWYYLKTRYYDSRIGRFVKEDGIKGDITDPESLNL YTYCTNNPVNLYDPDGEFAIVPLLVGLAVQTVSGVLLDYIIDRKNFNLWKSIGTNLVVSM VGIVTGGIASSIKLGTKITKVAPKVAKLTERLVRWGSEKAVKKPNSKVAKFINKFTEDVA KPFIDKLGTPKTWVMAGLKALTQTGADATIDMISGEKVTAGSISLDILLRTAFGAFGSAT GNVKLFGGGLRRIFKLPPSKKAESWDAAAKRVVAKYLIEDLEAGLSNFGKKCSLDALKGI NLGRILGRAGRKFTKYIVNKLEMQKYSITNVSGIQGESGGGVLDEFIVQNNKKTGEDVKW TRGSGVSSPATIGIWGTAGEHEVGQIKGVAAQGLNFSWSIQSKMGADLNLGAVRGGEPRT PTVDLKFGYMAPMRRMIVPRVGRVLAY NT seq 9084 nt NT seq  +upstreamnt  +downstreamnt gtgagatttccaaagaaattgagagtattgttaacatttcttattcttttaatcttcacc cttaatacaaatctatatgtcttttcacaaagtagtaatctcaagaaccaagagtcaaat tacaaagatttaataggacactgggcagaggatgaatttagatggttgatagagaaggga ataattagtggagtgaaggcaaatggagtaatgttagcaaagccagatgagaagttaaca agagcggaagctgttgtgattatactaagaactatatttgagaaggagcttcttgaggag gaaataaagaaattaaaagaggatagttttaaagatatttcaaatcattggagcagagat tacataaatgtagctgcgagatatggtttggttaaaggttattcagacaagacatttaga ccaaatcagagaattacacgtgaagagtttgttttaatggtgataagggtgagcaaatat agggagcaagcagcaagtgagggcaagcaaaacgataagaaggtaaaatttaaagatgtg agtgttaacaattttggatataacgaaataatttttgcagttgagaaaggcttgatcaaa ggctatagcgatggtacatttagaccaagaagttatataagccgagcagaagcagcagta atagttgcaagggcattgaaagcggatttattcattacctatagagcaaagaagcctcaa ataactaaagaaaatgcgagcgaattttttgaacttgttgttgataaagaggaagtaggt ataatagaaaaggcgaagctcacactaaagagcaaagtaaagggtgtcaagtttacagca gagtggaaggcaagtggtggtaaacttgaggtagctaaagataatcagagtgcgatttgg agcccgacagatgcagaagagggtaagaattatattgtgactgttgaagtaaccatcctg acagataatggggaaaagataaaaatacaaaaggttgcaaggatacgagtgaacgagggc gtccaactgacaaagaatgaaaacatagaagaaccggtgaataaaatagatccattattt acccaaagagaatcaaacaatttagttcaagaaaattctagttatagcccattagaagaa aaactttcagcgccaatattgaaaatagcaaaaaaaggtgagtatgtagagcttacttgg aatgaggtaaaaggtgcaaggagttacattgtaaaaagagggaaggtaagcggggagtat gaggtattggcaagcggagttattactacggcgtatattgatggtcctatggatggaaaa acaacgtattactatgtggttgcagcagtgggagcaaatggtacgaccagtatgaattca aatgaggtagtgtacaaagcactgccacaatcaccaaagttatttgggacatacaatggg acaagtgcacgtcttacatggacgaaagcgaatggagcagagaggtatactctttacagg agcacagtcagtggaggaccatactatgcaattgcagaaaacttacttaccaatgtgttt gaagatactaatttgacatcaggtacagtgtattactatgtagtaaaagccattaacgaa ttaggagaaagtgaatactcaaatgaggtagcgatgggggaaggagttacagttgcagct aaatttaatcctgatgacgacgaggatggagatgggttgacaaatgtagatgagttaaaa tatgcaacaagtttgaagaagaatgatagtgatggagatgggttgagtgacggttatgaa gtaaagaaaggaacaaatccattagtaccggatacagataatgacgggatatatgatgga gcagaggttgtgatgggaacagacccattgacaaagaatcctttgacaagtgccgagaaa tatgcggtatcggaagatggtaaagtttttgtaagagcactttctgatgcaaatatttta atagctcccttacaggtaaagaggtctgacaatgtgtttattaactcattgaaaggaata gtaggtaaagcgatagagataactgcagggggatttgatataaagaaggcagagatagta gtgaactatgatgaagcagaacttaatggtgtagaagagaataatttaatgctgtattat gtcaattatgacaagaagatattagagccgttagaagatgttgtagtagatacagtgtat aatcgagtttcgggtaagacagagcattttagcacatttttacttggtgataagaatatg ccagttgatctttccaaagtagatattgtgtttgtacttgacaactcaggtagtatgtcg tctaatgacccaaattattacagaatagaagcaacaaagaaatttatacaaaatatagat gaacttaacaatagagttgggttagtagatttcgatagctctgtaagtgttagatcaaat ttgacatctgacaagagcaaattgttacaagccctaaatgcgatgagatggacaggtggt tctacgaatataggaggaggattgaaagctgcgctgggattattcgaccaagagcaatct aaaaagataatagtacttttatcagacggatatcacaacacaggaattcatccaaacgat gtactaccagaattaataaaacaagaaatagtagtaaataccatcgcattgggtaaagat tgtgatagggagttattacatgatatagctgataagacaaaaggaggctatttttacgtt gataatacaggaggactttctcaagaagatgtagacaagcaaatagagctaatatacgag aaactaactaaatggataacccttcaaaaggaagcagaaaagaatctcaaacctcaagaa gtgttaagtatagagtacaatgatgtaggtttagacaatgaagagtttcataaatggata accacagctatgactaatttacttacgggaaattatatggaagagtttgatgatattagt atagaggggaatggtcctgagtttaaatttgtgaggtattacaattcttttgctaatcaa caaaagacgataataggtaaaggttttagaaccaattttgacagcaagcttacaaaggta gcgggagtcggaatagtccaagcaggggtattgaatgtaagagaaggaccgaatgtaaat accaaaaagatagggtatttgactaaggggacaaaggtgcagattgaagaggatggcaac aagaacggcagtggttggcacagaattgtgtataagggtaaatctgcatatatttgcgca gcatatgtcaaagagctaaacaatggaattgaagtaacatatccaagtggtagtatgata gtatttgtggatgataatggagatgggatttacttgtcagacagtaacaaagctgacaag gtagttttgtcaggtaatgaatatatattgatacaaagagatttgacgagatatgttttt gacaagagtggaaaacttatcaaaattggtgatagaaatgaaaattacattactattgag tattctggtgaaaagatatctgcggcaagagatgtttttggcagaaaattagaatttatc tttcaaggggataacctggtatgtataagagagaacatcaagggtaaaataggtaggaaa gtagaatttgtatatgatgacaaggatagactaataaaagtaattggggttgatggcgca gagacaagatatgaatatgatgagaaagacagactcaagaggataattgatgcgaacggg caccaggtggtaaggaatgaatatgatattttaggtaggatagtgaggcaatacgacggg gaagatataatcagatttttcatatacgatgatgaagacagagtaagatattatatagac gaaaatggtaatgagagtatggtagtattcaatgaagagctaaaaccaataaaagagaga aatgcattgggtgggggttgtgactacaagtatgagattaatgacggttcaaagtggata gacgtgacaactcctgatttggataaggatgtagttgtgagcggtcttacacgggaaaaa tatcaagagctgaaagagaaaggtagcatgacaaagcaggtcacaattcagataataaag acttctcctagtttagaaacagcaaagactacacaaatatacgatggacgtggcaatatt atccaagtgatagatgcttatggtaattcaataaaaatgaaatatgataacaataataat ttaattgagcaaacagacaggattggtgctactaccaaatatatttatgatgccgagggt ataaatttaattgagaaaattgatccacttggaaacaaggaaagatatgaatattattct ataaattcgggcataaaactcaatggtttacttgcaaagtatatagataaaaatgggaat gagacgagatactattatgaagatgaatataacaatttaacacgagtggttgacgcagaa ggttatgagacaaaatatgaatatgaccagttaggcagaaaaataaaagaaataaatgaa agaggatatgtaacaaggtttgagtatgatccagaaggcagaattacaaaagaaatagac gcgtttggtaaaacaaaagtatatgtatatgacaaagtaggtaatttaatagaagaaatc gatcgccttggcaacaaaacaagatatgtatacgatgataaaaacaggcttataaaagaa attgatgcgatgggtggagagtatcaatacttttatgatcctgtagggaacaagataaag gagatagaccctgaaggaagagtaaccaaatatacttatgatgaactgaacagacttgtt gagatagaagatgcagaaggcaataaaaccaaattcaagtatgatttagcaggcaggaaa atatcagaggtaaatgccttaggaaaagagacaagatatgaatatgatttattaggaaga cttacgaaagtgattgatcctttaggtaaaacccgaagttaccaatacaatgctgaaggg tataaaatatcagagacgaataaaaatggtgccactacttcatatgtatatgatttagca ggaaggttaataacagcatattatccagatggaactagaaggagctataactacgataat aatggcaatgtaatcagtatcatcaatccaaaaggatatgtgacaaaatactactacgac aaattaaacagggtaatcaaggtagaagacagcaacggcaaagcagtaacatatgagtat gacggttgtggaaatgtaatttgctttaaagacaaaaaaggaagagaaacaaggtacgaa tatgatgctcttgacagagtaaaaagagtaatagcaccaaacggagcacaaacagagtat gagtacgatgcagagggcagagttgtcaaggtcacagatgcaaaaggaagaagcgaggaa tatatgtatgatgagcttggtagagttgttgtatataaggacaagttaggaaatgtaatc aaatacgcatatgacaaggtgggtaatagaacacagcttattgatagaagaggaaatgca acaaagtatgagtatgataaattgaatagggtagtaaaggtgattgacgcgtatggaaat gaaagtaggctggagtatgatgctgttgggaataatatagcaaagacagacagaagagga aacacaacaaagtatgaatatgatgcaaataacagactagtgacaataattgatccatat ggaaataagattagatttgagtatgatggagaaggcaatgtaatatgcagaatagatgca agagggaacagaatgtattatagttatgatggattgaacaggttgaggactgtacaagac aacgatggcaggaaaactgtttatgaatatgatgagaatgggaatatagtaaagataata cgaccagacggcaagtatgtaacctacaggtatgacagtttggacaggttggtaagagtt acacaagagaatggagctgtgacagagtataggtatgacgaagaggataatttaattgag gtcaaggatgggaatggcaatataacaaggtatgaatacaatgagatagacagacctgtc aaagtaatagatgcaatcggcaatgaagaaagatatagctatgacttagtagggaatata gtatatgcgatagacaagaatggagttaggatagagtacagctatgaccaacttgacagg gtagtgcatgttaaagctggcggagtagaggtgagatatagttatgatgaggaaggcaac agagtccagatgtcagacaaaacagggataaacaaatatgaatatgataagctaaatagg ttgataaggaaaatatacccagatggcaagagtatagaatatgaatacgaccaagaaggt aatgtaataaaggtaaaagacccgagcggatatgtgacgcaatacaagtatgataagatg aatcggcttgaagaggtgataacctcagatggtagcacaagatattcatacgatgagaat ggaaatgtgaaatcaatagagtatccgaataagctgaagtttgagtacgaatatgatagc aggaacttacttaaaggattagtggttacagcgagagatgttgtaaggaatgagatagat aagtattatactcctagcagtgtgatagaacaaggtggtggcacaagcacatatatttac aagtatgaatatggatatgatgacaatggcaatatgatatacaaacaggagcctataggt aggacagagtacaagtatgatgaggtaggtagagtagctgaagtcaaagatagatttgga cgattaactcgatatgaatatgacaatgtaggcaatagaataaaggagatagtagaggtc ccgacaggtataagcagagatagtcttaattctgaagggctgaatattagatacgattat ggagaagtatacagcgttgagaagacttacacatatgataaattaaatagactattgagc attgaatctcgagacagagaagggaatattgtaggtgttaacagctacggctatgacaac aatgggaatttgataagagcagaggaaagatggcgcacaagagtatacaagggtcaggga agcaaagtagttgcaaaagagatagaaaagcaagatttacagactgtatatcaagatgca tatactgcagagaatgttcaggtacagacaagcgtatataactcagcatatagtttggac aatagcacagtagtgatttcagtatatgatagtgtgtacaatagtgcatacaatttacaa aattcaagttctgagcagagtattactgtaaaagacgtagtttacgagacggtatatgaa gatgtttatgagatagaagagaagattaaagtaagtgaatttagatatgatgagcttggc aggatggtatgggcaaaggttgacaataatgtggtagaatttgaatacgacggagatggg ctcagaacaaagaagataacagcaaatgatgtaaaaacatactactggtctggcagcaat cttatttatgaaagcgatgcaacgggcaaaggattcagcagcatatggggcttgagtatg ataggaaggacggacggtagtaatacagagtattttatgaaagatgggcatggagatgta cttatcacgtttgacaaaagtgggcagaggaagaatatatatgaatatgatttgtatggt aatgtaataaaagaaatagagacagggcaagagaacccgataagatatgctggatattac tatgacaaggaattagaatggtattatttaaagacaaggtattacgatagtaggataggg aggtttgtgaaagaggatggcataaagggagatataacagacccagaaagtttgaaccta tacacttactgtacaaacaatcctgtgaatttatatgatccggatggagagtttgcgata gtgccactgttagtaggattagcagtgcagactgtaagtggagtattgttagattatata atagataggaaaaatttcaatctttggaagagtattggaacaaatttagtagtgtcaatg gttggtatagtaacaggaggaatagcaagttcaataaagcttggtacaaaaataactaaa gttgcaccgaaagtagcaaaactaacagaaagattagtaagatggggaagtgaaaaagct gttaaaaaacctaactctaaggttgcaaaatttataaataaatttacagaagatgttgca aaaccttttattgataaattaggcactccaaagacatgggttatggctgggttaaaagca ctgacccaaacaggtgcggatgcgacgatagatatgatatctggtgaaaaagttaccgca ggatcaatttctctcgatatacttttgagaactgcatttggtgcgtttggctcagcaaca ggaaacgtgaaactatttggaggtggattgaggagaatatttaaattacctccctctaag aaagcggaaagttgggatgctgctgctaaaagagtagttgcaaaatatttgatagaagat ttagaggcgggattatcaaattttggcaaaaagtgttcacttgatgcattaaagggtatt aacttaggaaggatattgggacgagcaggaagaaagtttacaaaatatatagtaaataaa ttggaaatgcaaaagtattcaataacaaatgtttcagggatccaaggggaaagtggtgga ggagtattagacgagtttattgttcaaaataataaaaaaacaggcgaggatgtaaaatgg acaagaggaagtggagtaagtagtccagcgacaattggtatctggggcactgcaggtgaa catgaggttggacaaataaaaggagtagcagcacaaggattgaattttagctggagcata caatcaaagatgggagctgatttaaacttaggggcggtaagaggaggcgagccgaggacg ccgacagtagatttaaaattcggctatatggcacctatgagaaggatgatagtgccgagg gtaggcagggtattagcatattga

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