Caldicellulosiruptor bescii: Athe_1063
Help
Entry
Athe_1063 CDS
T00857
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ate
Caldicellulosiruptor bescii
Pathway
ate03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Athe_1063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ate03021
]
Athe_1063
03019 Messenger RNA biogenesis [BR:
ate03019
]
Athe_1063
Transcription machinery [BR:
ate03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Athe_1063
Messenger RNA biogenesis [BR:
ate03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Athe_1063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
TEP1_CUB2
AAA_24
Nuc_rec_co-act
S1CSD-TOTE-2
NACHT
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
ACM60164
UniProt:
B9MR60
LinkDB
All DBs
Position
1158451..1160121
Genome browser
AA seq
556 aa
AA seq
DB search
MPGSLDEFLKGKSIIELREIAKSLGIQKYSLLKKGELMEAIRNFLGSSKEDATVLEGIGK
KEKGRRGRKKKSEIAEVQQTFELKSEELQSKVGETNEKEEERPSEMENKEEDNIKEQTLS
EDIQKEEEKTEMPTDVSLNEEKKEESKVIELKPKKEEKREDKMQIEIPPELKELEGKVEI
GGIGEGVLEIIYEPGGGGGYGFLRDDSFVPGPNDIYVSPSQIRKFNLKTGDKIRGPIRLP
KENEKFAGLLYVQSVNDMKPEEVAKRTPFEDLTPIFPNKRIILENKNEPKDLAVRLIDLI
APIGRGQRGLIVAPPKAGKTTLLKKIANSILTNYDDLHLIVLLIDERPEEVTDMQDSIKA
EIHYSTFDETPEHHIKVAEMVLERAMRLVECKKDVVILLDSLTRLARAYNLVEPPSGRTL
SGGLDPNALHKPKKFFGAARNLKEGGSLTILATALIETGSRMDDVIFEEFKGTGNMELHL
DRKLSEKRIFPAIDINKSGTRREELLLSEEEKAAVDAIRRALSNFGTAETTERIISMLSQ
TKSNEEFIRKILQNLR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgggtcacttgatgagtttttaaaaggaaagtctattattgaacttagagaaata
gcaaaaagtctgggtattcagaaatattctttgctcaaaaaaggtgaattgatggaagct
attagaaattttctgggaagttcaaaagaagatgccacagttcttgagggcataggcaaa
aaagaaaaaggaagaagaggaagaaaaaagaaatcagaaattgcagaagttcagcagact
tttgaattaaagagcgaggagctacaatcaaaggttggagagaccaatgagaaggaagag
gaaagaccaagtgaaatggaaaataaagaagaagataacataaaagaacagactttgtct
gaggatatacaaaaagaagaagaaaaaactgaaatgccaacagatgttagtttaaatgag
gagaaaaaagaggagagtaaagtcatagagttaaaacctaaaaaagaagaaaaaagagag
gataaaatgcagatagaaattccgccagaattaaaagaacttgaaggtaaagtggagata
ggcggcataggcgaaggagttttggagataatttatgagcctggtggcggtggcggttac
ggatttttgcgcgacgattcgttcgttcctggcccaaacgacatatatgtttcgccatct
caaatcagaaaattcaatctcaaaaccggagataaaattagaggtcccattaggcttccg
aaagaaaatgagaagtttgcagggcttttgtatgttcagagcgtcaacgatatgaaacca
gaagaagttgcaaaacgcactccttttgaagaccttacccctattttcccaaacaaaaga
ataattttggaaaataaaaatgagcctaaggatttagcagttagactcatagaccttatt
gcgccaattggaagaggacagagaggattaattgtagcaccaccaaaagcaggtaaaact
acgctattaaagaaaatagcaaatagtattctgacaaactatgatgatttgcatttgatt
gtactgctcattgatgaaagacccgaagaggtcactgacatgcaagattcaataaaagca
gagatacattactctacatttgatgaaactcctgaacaccacataaaagttgctgaaatg
gttttagagagggctatgagacttgttgagtgtaaaaaagatgttgtcattttgttagat
agcttgacaaggcttgcacgtgcttataacttagttgaaccaccttctggcagaacactt
tctggcggtcttgacccgaacgctcttcataaacctaaaaagttttttggtgctgcaaga
aaccttaaagaaggtggtagtcttactatccttgcaacagcgttgattgaaacagggtca
cgaatggatgatgtcatatttgaagagttcaagggtactggcaacatggagttgcacctt
gacagaaaactttctgaaaaacgaatattcccggctattgatataaacaagtcagggacg
cgaagagaggaacttttgctgtctgaagaggaaaaagcagctgttgatgctatcagaaga
gcactttctaactttggaacagctgaaactacagagagaattataagtatgctttcccaa
acaaagtcaaatgaagaattcataagaaagatattacaaaatttaagataa
DBGET
integrated database retrieval system
