Caldicellulosiruptor bescii: Athe_1437
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Entry
Athe_1437 CDS
T00857
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
ate
Caldicellulosiruptor bescii
Pathway
ate03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ate00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Athe_1437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ate03400
]
Athe_1437
DNA repair and recombination proteins [BR:
ate03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Athe_1437
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Athe_1437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_16
AAA_33
AAA_22
AAA_21
DnaJ_CXXCXGXG
NACHT
AAA_15
AAA_23
AAA_25
cobW
ATPase
Viral_helicase1
WipA_Phos
Motif
Other DBs
NCBI-ProteinID:
ACM60535
UniProt:
B9MS81
LinkDB
All DBs
Position
complement(1517692..1520520)
Genome browser
AA seq
942 aa
AA seq
DB search
MSKEYIVIKGAKEHNLKNIDLVLPRDKLIVFTGLSGSGKSSLAFDTIYAEGQRRYIESLS
SYARQFLGMMEKPDVEYIEGLSPAISIDQKTTSKNPRSTVGTITEIYDYLRLLFARVGKP
HCYICGKPISQQTVDQMVDEVLKLKEGTKIQILAAVVRGRKGEYQKLFEDLRRSGFARVR
VDGIVYELEEEIKLDKNKKHSIDVIVDRLIVKEGIESRLAGSIETALQLAGGIVTVSIVD
GDEIVFSQNFACVDCGVSYEEITPRLFSFNTPYGACPTCMGLGYLQKVDPDLLIPDKSIP
IGQVEINGWNFTETNSYSRMILESLAKEYNFSLNTPVEKLDKKILDIFLYGTGEEKIKIY
TPRGIYFAKYEGLINNLERRYKETQSEYVKQEIEEYMSTFTCPDCQGKRLKKEALAVLIE
GKSIADVADMTVLQAKEFLKKLNLQGKDKVIAQPIIKEILARLDFLIDVGLDYLTLSRSA
GTLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNHRLIKTLKKLRDLGNTLIVV
EHDEDTIRSADFIVDIGPGAGEHGGRVVAAGTLDDIISCEESITGQYLSGKKKIEIPDKR
REPDGRWLTIKGASENNLKNIDVSFPVGLFTCVTGVSGSGKSTLVNEILYKAASAILNKS
KEKPGKFQEIIGLEHFDKVINIDQSPIGRTPRSNPATYTGVFDYIREVFAQTPEAKLRGY
KAGRFSFNLKGGRCEACSGDGIIKIEMHFLPDVYVPCDVCKGKRYNRETLEVKYKDKTIA
DVLEMTVEEALEFFKNIPRIKSKLQTLYDVGLGYIKLGQPSTTLSGGEAQRVKLATELSK
KATGRTLYILDEPTTGLHMDDVNKLIAVLQRLVDMGNTVIVIEHNLDVIKVADYIIDLGP
EGGDKGGEVVVCGSPEEVAMCERSYTGMFLKEILKDRIYAKK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagagtatatagttataaaaggtgcaaaagaacacaacctcaaaaatattgat
ttggtacttccacgagacaaacttattgtttttactggtctttctggttcaggaaagtca
tctttggcgtttgatacaatctatgctgagggacagagaagatatatagaatctctctct
tcttatgcaaggcaatttttaggaatgatggaaaaaccagatgtagaatacattgaagga
ctttctccggcaatttcaattgaccaaaagacaacctctaaaaatccacgttcgactgtt
ggaacaattactgaaatttacgattatttgaggcttttgtttgcaagagttggaaaacct
cattgctatatatgtggaaaacctatctcccagcaaacagttgaccagatggtagacgag
gtattgaaacttaaagaggggacaaagatccaaatacttgcggcagttgtaagaggaaga
aaaggtgagtatcagaaactgtttgaagacctgagaaggagcggatttgcaagagttaga
gtagatggtattgtatatgaacttgaagaagagataaaacttgataagaacaaaaaacat
agtattgacgtcattgtggataggctcattgtaaaagagggaatagaatcaaggcttgcg
ggttcaatagaaacagcgctccagctcgcaggggggattgtaactgtatctattgttgat
ggcgatgaaattgtgttttcccaaaactttgcatgtgtagactgtggagtttcgtatgaa
gagataactccacgtcttttttctttcaacacaccatatggtgcatgcccaacgtgtatg
ggtcttggttatttgcaaaaggtagaccctgacctattaattccagataaatctattcca
ataggtcaggttgaaataaatgggtggaactttactgaaacaaattcatattcaagaatg
attttggaatcacttgcaaaagagtataattttagtttaaatactcctgttgaaaaactg
gacaagaaaatattagatatctttttatatggaacaggcgaggagaagataaaaatttat
actccacgtggtatatactttgcaaagtatgaagggcttataaataatcttgaaagaaga
tataaagagacccagtcagaatatgtcaagcaagagattgaagagtatatgagtacgttt
acatgtcctgactgtcaagggaaaagacttaaaaaagaggctttggcggttttgatagag
ggtaagtctatagcagatgttgctgacatgaccgttttacaagcaaaagagtttcttaag
aagttaaaccttcaaggaaaagataaagtaattgcacagccgataataaaagagattctg
gcaaggctggactttttgatagatgtaggacttgattacttaaccctttcacggtcagct
ggcacactttctggtggtgaagcgcagagaataaggcttgctacccagataggatctgga
cttgttggagttttgtatattcttgatgagccaagtataggattgcatcagcgtgacaat
cacagactaataaaaacccttaaaaaactcagagatcttggcaacacattgattgttgtg
gagcatgatgaggatacaataaggtcagctgattttattgtagacattggaccaggagca
ggcgagcatggtggaagagtggttgctgcagggacattggatgatataatttcatgtgaa
gagtctatcacaggacagtatctttccggaaagaaaaagattgagatacctgataaaaga
agagaacctgatggtagatggcttactatcaagggtgcatcagaaaataaccttaaaaat
attgatgttagctttcctgttggactttttacttgtgtaactggtgtttcaggctcaggc
aaaagtacccttgtaaacgaaatactttataaagcagcaagtgcaattttgaacaagtcc
aaagaaaaaccaggtaaatttcaagagataataggccttgaacattttgataaggttata
aatatagatcaatcacctataggaagaactccacgttcgaaccctgcaacttacacaggt
gtttttgattatatacgagaagtttttgcccaaacgcccgaggcaaagctcaggggttat
aaggcaggaagatttagtttcaatttgaaaggtgggagatgtgaagcttgttcgggagat
ggtattataaagatagaaatgcattttttacctgatgtatacgtaccgtgcgatgtgtgc
aaaggaaaaaggtataacagagagacgttagaggtaaagtacaaggataagaccattgct
gatgtgcttgaaatgacagtggaagaggcgttggaatttttcaagaacattccgaggata
aaatccaagcttcaaacactttatgatgtagggcttggttatataaaactgggtcagcct
tccaccactttatctggtggagaagcgcagagagtaaaactcgcaacagaactttctaaa
aaagcaactggaagaaccctgtatatcttggacgagcctacaacaggtcttcacatggat
gacgtcaataagttaattgctgtccttcagcgccttgtggatatgggcaacacagtaatt
gtaattgaacacaatcttgatgttataaaagttgcagattatataattgatttaggacca
gagggtggagataaaggcggcgaggtagttgtgtgtggcagcccagaagaggttgctatg
tgcgaaaggtcatatacaggaatgtttttaaaggaaatattgaaagatagaatttatgcc
aaaaaatag
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