Caldicellulosiruptor bescii: Athe_2129
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Entry
Athe_2129 CDS
T00857
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ate
Caldicellulosiruptor bescii
Brite
KEGG Orthology (KO) [BR:
ate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ate03019
]
Athe_2129
03009 Ribosome biogenesis [BR:
ate03009
]
Athe_2129
Messenger RNA biogenesis [BR:
ate03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Athe_2129
Ribosome biogenesis [BR:
ate03009
]
Prokaryotic type
rRNA processing factors
Athe_2129
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
TRAM
DnaJ_CXXCXGXG
Beta-prop_VPS8
Motif
Other DBs
NCBI-ProteinID:
ACM61204
UniProt:
B9MLY1
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Position
complement(2263280..2264995)
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AA seq
571 aa
AA seq
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MQSEIIVDVSFNQTRVAVLEDKELVEIYIEREDSQSIVGNIYKGVVENILPGMDAAFVNI
GQEKNAFLYLGDVNRLEFGDTDEYYEIKTNPLALRCGQEIVVQVIKEGYDQKGPRVTTNI
TLPGRYLVLLPCTEYVGVSKRIESEEERQRLKEIACRIRPEGMGLIVRTAAENKSEEILK
SELEFLKNMWKKIRQKSCQSAPVLLYKDYDLVFKAVRDMFTNQVDRFVINDRKKYNKIIE
FLSSYAPSLKSKVEYFNLATNIFEYFQIEQKLSKALSKRVWLKSGGYIVIDETEALTVID
VNTGKYVGKTDVAETILKTNLEAAQEIARQLRLRDIGGIIIIDFIDMKNPDHQKIVLDAL
KEALKRDKTKTVVVDITPLGLVEMTRKKVRQRLSCVMQSNCPYCEGTGKILSPESVAFKV
LKEIEWYCKNKVEDKFFVEIHTKVCEILRKGEIDRIKELEQKYKKKIYIKASSNIHINKF
TICPVKDEDHYMALCGWLCEGDEVLAFVEEEDRFNPKNAVGYVNQNRIELDDASDLVGKY
IYAKVEKVYGTLSKGKILDVYEVDKEDVKEC
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtgagattatagttgatgtaagttttaaccaaacaagggttgctgttttggaa
gacaaagaacttgtcgagatttacatcgagagggaagacagtcaaagcatagtaggaaat
atctacaaaggggttgttgaaaacatcctgcctggtatggatgcagcttttgtcaatatt
ggtcaggaaaaaaatgcttttttgtaccttggcgatgtgaacaggcttgaatttggagat
actgatgagtattatgaaataaaaacaaatccgcttgccctaaggtgtggccaggaaata
gttgtgcaggtaataaaggaagggtatgaccagaaaggtccaagggttaccacaaacata
acgttgccaggaaggtacttagttcttttgccatgcacagaatatgttggtgtttcaaaa
aggattgagagtgaagaagaaaggcagagacttaaagagatagcctgcaggataagacct
gagggaatgggtttgattgtcagaactgcggcagaaaacaagagcgaagagattttaaaa
agcgaacttgagtttttaaagaatatgtggaaaaaaataagacagaaaagctgtcagagc
gctcctgttcttctttacaaagactatgaccttgtgttcaaagctgtaagagacatgttt
actaatcaggttgacaggtttgttataaacgataggaaaaaatataacaagataatagag
tttttatcctcttatgccccgagcttgaagagtaaagttgagtattttaaccttgcaaca
aatatattcgaatattttcagatagaacaaaagctttcaaaagctttatcaaaaagagtg
tggctcaaaagtggtgggtatatagtaatagatgagacagaggcattgactgtaattgac
gtcaacacaggaaagtatgttggcaagactgatgttgcagaaacaatcttaaagacaaat
cttgaagctgcacaggagattgcaaggcagctaaggctcagagatattggcggaataatc
ataattgactttattgatatgaaaaatccagatcatcagaagatagttttagatgctttg
aaagaggctctcaaaagagacaagacaaaaacagtggttgttgacataacgcctcttggg
cttgttgagatgacaagaaaaaaggtaagacaacgactttcatgtgttatgcaatcaaac
tgtccttactgtgagggtacaggtaagattttatctcctgagagcgtcgcgtttaaagtt
ttgaaagagattgagtggtattgcaaaaacaaggtagaagacaagttctttgttgaaata
cacacaaaagtatgtgagattttaagaaagggtgaaattgacaggataaaagaacttgag
cagaagtacaaaaagaaaatctatatcaaagcttcttcaaatattcacataaataagttt
accatatgccctgtaaaggatgaggaccattacatggcgttgtgtggttggctttgtgaa
ggagatgaagttttggcgtttgttgaggaggaagacaggttcaatccaaaaaatgcggtt
gggtatgtaaaccagaatagaatagagcttgatgatgcatctgaccttgttggcaagtac
atctatgcaaaggttgaaaaggtgtatggaacactttcaaaaggaaagattttggatgtg
tatgaggttgataaagaggatgtaaaagagtgttaa
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