Caldicellulosiruptor bescii: Athe_2181
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Entry
Athe_2181 CDS
T00857
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ate
Caldicellulosiruptor bescii
Brite
KEGG Orthology (KO) [BR:
ate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ate03032
]
Athe_2181
03400 DNA repair and recombination proteins [BR:
ate03400
]
Athe_2181
Enzymes [BR:
ate01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Athe_2181
DNA replication proteins [BR:
ate03032
]
Prokaryotic type
DNA Topoisomerases
Athe_2181
DNA repair and recombination proteins [BR:
ate03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Athe_2181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_RPB9
HypA
Toprim_4
Zn_Ribbon_TF
HVO_2753_ZBP
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ACM61256
UniProt:
B9MM33
LinkDB
All DBs
Position
complement(2308857..2310938)
Genome browser
AA seq
693 aa
AA seq
DB search
MKKLVIVESPAKAKTIAKYLGKEFKVEASMGHVRDLPKSDLGVDIENGFVPKYINIRGKA
DVINKLKKYAQEAEKVYLATDPDREGEAISWHLATILGLDTNDNVRITFNEITKKAVQES
LKNARPIDQNLVNAQQARRILDRLVGYKLSPFLWEKVKGGLSAGRVQSVATRLVVEREEE
IENFKPEEYWTLEAVFKKDVQEFKAKFYGDKKGKIELKNQDHVQKIEEKIKNKEFKVVKI
KVSEKKKNPPPPFITSTLQQEASRKLRFTPAKTMAVAQMLYEGVEIKGEGSVGLITYMRT
DSTRVSEEAQQAARSLIVQKFGKEYLPEKPRVYKTKKDAQDAHEAIRPTYLDMDPESIKD
SLTLDQYKLYKLIYDRFLASQMESSVYEVLSAELEVEGYIFKLTGSKLKFAGFMEVYVEG
KDTEDEEEENQLPEIREGEALKPIKLESKQHFTQPPSRYTEATLIKALEENGIGRPSTYA
PTIQTILERGYVAKEDRFLKPTELGRIVTNILKEYFKDIIDIEFTAELESNLDKIEEGKL
EWTEVVKKYYQPLEKELEIARATLLKVKVEDEETDIVCENCGRKMVIKKGRYGKFLACPG
YPECKNTKPYYDYLDVLCPKCGKRIIEKKSKKGKRYYTCEGYPDCDLILWEKPVKNCPKC
GSLMFEKGKKGNKKLVCSNENCAYQEKTGEKGE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaacttgtcattgtagagtcacctgcaaaggcaaaaacaattgcaaagtatctt
ggtaaagagtttaaagtagaagcttcaatggggcatgtaagggaccttcccaagagtgat
ttgggcgttgatatagaaaatggttttgtccctaagtatataaacatcagaggtaaggca
gatgtaataaacaagctaaaaaaatatgcacaagaagcagagaaggtataccttgcaaca
gaccccgacagggaaggcgaggcaatctcatggcatttagcaactattttagggcttgat
acaaacgataatgtgagaattacattcaatgagataacaaaaaaggctgtacaggaatct
ttgaaaaatgcaaggccaattgaccagaacttagttaatgcccagcaagccagaagaatt
ttagacagacttgtcggctacaagctaagtccatttttgtgggaaaaggtcaagggtgga
ctttctgcaggaagagttcagtctgttgcaacaaggcttgtggttgaaagagaagaagag
atagaaaattttaagcctgaagagtactggaccttagaagctgtatttaaaaaagatgtc
caagagtttaaggcaaagttctatggagataagaaagggaagatagagctaaaaaatcaa
gatcacgttcaaaaaattgaagaaaagataaaaaataaagaattcaaggttgtaaagata
aaggtgtcagagaagaagaaaaatccgcccccaccttttataacaagcacacttcagcag
gaggcatcaagaaaactgagatttactcctgcaaagacaatggcagttgcgcagatgctg
tatgaaggtgttgagataaaaggtgagggaagtgttggacttataacatatatgagaaca
gattcaacaagggtttctgaagaggcacagcaggcagcaagaagtcttatcgtacagaag
tttggcaaagaatatcttcctgaaaagccgagggtttacaagacaaaaaaagatgcgcag
gacgctcatgaggctataagacctacttatttggatatggaccctgagagtataaaagat
tctctgactcttgatcagtacaagctgtacaaactcatttatgacagatttttagcgtcg
cagatggaaagcagcgtatatgaggttctttcagccgagcttgaagttgagggttatatt
tttaaactcacaggttcaaagctcaagtttgcagggtttatggaagtatatgttgaaggt
aaggatacagaagatgaagaggaggaaaatcagcttccagaaattagagaaggagaggct
ttaaagcccataaaacttgagagcaaacagcattttactcaaccgccttctcgctatact
gaagcaaccttaataaaggctttagaagaaaatgggataggaagacccagcacatacgct
ccaacaatccagacaattctggagagaggatatgttgccaaagaagataggtttttaaaa
ccaaccgaattgggcagaattgtaacaaatatacttaaagaatatttcaaagacataata
gacattgaatttactgcagagcttgagagcaaccttgacaaaattgaggaaggaaaactt
gagtggacagaggtggtaaaaaaatactaccagccacttgaaaaagaacttgagatagca
cgagctactttgctaaaggttaaggttgaggatgaggagacagacattgtatgcgaaaac
tgtggaagaaaaatggtgataaaaaaaggtagatacggaaagttcttggcatgtccagga
tatcctgaatgcaaaaacacaaaaccttattacgattaccttgatgtgttgtgtccaaag
tgcggcaagaggataatagaaaagaagtccaagaagggcaagagatattacacgtgcgag
gggtatcctgactgtgacctaattttgtgggaaaaaccagtcaaaaactgtccgaagtgt
ggcagtctcatgtttgaaaagggcaagaaagggaataaaaagcttgtatgttcaaatgaa
aactgtgcttaccaagaaaaaacgggggaaaaaggtgagtaa
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