Arachidicoccus terrestris: K9M52_00480
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Entry
K9M52_00480 CDS
T08223
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
atee
Arachidicoccus terrestris
Pathway
atee02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
atee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K9M52_00480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atee03021
]
K9M52_00480
Transcription machinery [BR:
atee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K9M52_00480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
Sigma70_ECF
HTH_10
HTH_23
HTH_28
HTH_40
HTH_11
Terminase_5
HTH_38
HTH_SB
UPF0122
HTH_VMAP-M9
Sigma70_r2
HTH_Tnp_ISL3
DUF722
HTH_29
wHTH_Par
HTH_Mga
HTH_Tnp_1
MNR
HTH_Tnp_4
NirdL-like_HTH
PF0610-like_N
Phage_antitermQ
HTH_20
PfkB
HTH_5
DUF5910
Motif
Other DBs
NCBI-ProteinID:
UAY55545
LinkDB
All DBs
Position
135343..135891
Genome browser
AA seq
182 aa
AA seq
DB search
MLEKIMNGDQKAFRDFYLLWEARIYTYFLNRTEDYIQSQELTQNTFIKLWEYRSTLSTEY
NLETQLFRKAKLIYIDWLRLQASMRKRKTAELDYAAANAAAAIGVTPSSLPEKIEKAISH
LPPMRQKVIRLSHIQGYAYKEIAQQLNISEKTVDNHIHKALKQLRQILNTLLLISLIFYR
IF
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
ttgctggaaaaaataatgaatggagatcaaaaagcattccgcgacttttatcttttatgg
gaggcgcgtatctatacgtatttcctgaatcgaaccgaagattatattcaaagtcaggag
cttacacaaaatacctttatcaagctctgggaataccgatccactttaagcaccgagtat
aacctggaaacgcagcttttcagaaaggcaaagcttatttatattgactggctgcggcta
caggcgagtatgcgcaaacgtaaaactgcggaactagactatgcagcagcaaatgcggcc
gcggcaataggtgttacgccctcttccctgccggaaaaaattgaaaaagccatcagccat
ttacctccgatgcgacaaaaggtgattcgcctttcccatattcaaggctatgcctataaa
gaaatcgcgcagcagctcaatatttctgaaaaaacagttgacaaccatattcacaaggcc
cttaaacagttacggcaaatattaaacaccctgttgttgatttcgcttattttctataga
attttttaa
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integrated database retrieval system
