KEGG   Arachidicoccus terrestris: K9M52_01320
Entry
K9M52_01320       CDS       T08223                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
atee  Arachidicoccus terrestris
Pathway
atee02020  Two-component system
Brite
KEGG Orthology (KO) [BR:atee00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    K9M52_01320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atee03021]
    K9M52_01320
Transcription machinery [BR:atee03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     K9M52_01320
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_16 HTH_40 HTH_23 Sigma70_ECF HTH_24 HTH_SB HTH_38 HTH_10 HTH_28 HTH_29 HTH_3 DUF2774 GerE HTH_49 PhyR_sigma-like Tctex-1 UPF0122 HTH_20
Other DBs
NCBI-ProteinID: UAY55702
LinkDB
Position
338931..339503
AA seq 190 aa
MANELVALLKAGDQEAFSQLYHIYAPGIAGKILRLVKSKAIAEELLQDVFLKVWENRQTI
DLDKSFRSYLFRIAENLVVDLFRRAAYNQKLLNYLAVNTSELYDPIADQELSQEIKTRLL
KALDTLPPQRKKIYVLCKLEGKSYQEVSELLGISLSTINDHIVKATKALKSYASGQELTA
VLLITAYLVK
NT seq 573 nt   +upstreamnt  +downstreamnt
atggcaaatgaattagtggctcttttgaaagcaggtgatcaagaggcgttctcacaatta
taccatatttatgcaccaggcattgccggcaagattctgcggctcgtgaaaagtaaagcg
atcgcggaggaattgctgcaggatgtatttttaaaggtctgggaaaatcgtcagacgata
gatcttgacaagtcctttcggtcttatctgtttcgtatagcggaaaacctggtagtagat
ctatttcgacgggcagcctataatcagaagcttcttaactatttagcggtcaacacatca
gaattatatgacccgattgcagatcaggaacttagtcaggagattaagacaaggctgttg
aaggccttagacacacttcctccccaacgtaagaaaatatacgtcttatgcaaactggaa
ggaaagagttaccaggaagtaagtgagctacttggcatctccctttcaacgatcaacgat
cacattgtcaaggctaccaaggccttaaagtcctacgccagcggccaggaactgaccgct
gtgttactgatcaccgcctacctagtaaaataa

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