Arachidicoccus terrestris: K9M52_01320
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Entry
K9M52_01320 CDS
T08223
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
atee
Arachidicoccus terrestris
Pathway
atee02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
atee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K9M52_01320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atee03021
]
K9M52_01320
Transcription machinery [BR:
atee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K9M52_01320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_16
HTH_40
HTH_23
Sigma70_ECF
HTH_24
HTH_SB
HTH_38
HTH_10
HTH_28
HTH_29
HTH_3
DUF2774
GerE
HTH_49
PhyR_sigma-like
Tctex-1
UPF0122
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UAY55702
LinkDB
All DBs
Position
338931..339503
Genome browser
AA seq
190 aa
AA seq
DB search
MANELVALLKAGDQEAFSQLYHIYAPGIAGKILRLVKSKAIAEELLQDVFLKVWENRQTI
DLDKSFRSYLFRIAENLVVDLFRRAAYNQKLLNYLAVNTSELYDPIADQELSQEIKTRLL
KALDTLPPQRKKIYVLCKLEGKSYQEVSELLGISLSTINDHIVKATKALKSYASGQELTA
VLLITAYLVK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgaattagtggctcttttgaaagcaggtgatcaagaggcgttctcacaatta
taccatatttatgcaccaggcattgccggcaagattctgcggctcgtgaaaagtaaagcg
atcgcggaggaattgctgcaggatgtatttttaaaggtctgggaaaatcgtcagacgata
gatcttgacaagtcctttcggtcttatctgtttcgtatagcggaaaacctggtagtagat
ctatttcgacgggcagcctataatcagaagcttcttaactatttagcggtcaacacatca
gaattatatgacccgattgcagatcaggaacttagtcaggagattaagacaaggctgttg
aaggccttagacacacttcctccccaacgtaagaaaatatacgtcttatgcaaactggaa
ggaaagagttaccaggaagtaagtgagctacttggcatctccctttcaacgatcaacgat
cacattgtcaaggctaccaaggccttaaagtcctacgccagcggccaggaactgaccgct
gtgttactgatcaccgcctacctagtaaaataa
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