Arachidicoccus terrestris: K9M52_01480
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Entry
K9M52_01480 CDS
T08223
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
atee
Arachidicoccus terrestris
Pathway
atee02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
atee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K9M52_01480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atee03021
]
K9M52_01480
Transcription machinery [BR:
atee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K9M52_01480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
UPF0122
Phage_antitermQ
EcKL
GerE
Sld7_N
Rrn6_HB
DUF6362
Motif
Other DBs
NCBI-ProteinID:
UAY55732
LinkDB
All DBs
Position
378194..378793
Genome browser
AA seq
199 aa
AA seq
DB search
MSSYDTYDDAALLLQLKQGGGHSDQSAFREIYDRYMEKLYRSACRKLVSPEQAEEIVHDV
LLDLWRRRAELDIEHLPAYLEKAVRFKVINYVNREKLPRFMEVFESLLFSPYTADSSFKD
EAFNQLLESWVETLPEKQRAIFVRHYVDGLSTREIAIETGLAHKTVQNNLSLSVQYLRTR
FGHLLMTIAILEAFSQFID
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttacgatacatacgatgatgcagcactgctattgcagttgaagcaaggcggt
ggtcatagtgatcagtcagccttcagggagatctatgaccggtatatggagaaactgtat
cgttctgcctgcagaaaactcgtcagtcctgagcaggcggaagagatcgtgcacgatgta
ctactggatctctggagaagaagagcggaactggatattgaacacctgcccgcctatctg
gaaaaagctgtccgctttaaggtcatcaattatgtcaatcgggagaaactgccccggttt
atggaagtattcgagtcgctgttattttctccctataccgcggacagctcctttaaggac
gaagcgtttaatcaactactggaaagctgggtagagacgctgccggaaaagcagcgggca
atatttgttcgccattatgtagacgggctcagtacccgggagattgccattgaaaccggt
cttgcccataagaccgtacagaataaccttagcctgtcggtgcagtacctgcgtacccgg
ttcggtcatctgctgatgaccattgctatactggaggcattttctcaatttattgattag
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