Arachidicoccus terrestris: K9M52_06015
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Entry
K9M52_06015 CDS
T08223
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
atee
Arachidicoccus terrestris
Pathway
atee02020
Two-component system
atee02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
atee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K9M52_06015 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K9M52_06015 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atee03021
]
K9M52_06015 (rpoN)
Transcription machinery [BR:
atee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K9M52_06015 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
MarR
DUF2280
Motif
Other DBs
NCBI-ProteinID:
UAY56557
LinkDB
All DBs
Position
complement(1495978..1497471)
Genome browser
AA seq
497 aa
AA seq
DB search
MALSQTIQQKLLQKLSPQQIQLMKLLQIPTANLEERIKEELEENPALEESGEEDVHDELE
TPADEYEQETDDDFEPDGSEQEYENIDISEYVNEGDDEIADYKLRSDGYQEAEDKQNIPF
KVESSLHETLKSQLGMLSLDDKEYTIAEQIIGSIDDDGYLRRELASIVNDLAFRQNIDAT
EEQVESIIQKIQQFDPAGICARDLQECLLLQLNRAGAEADEHTKVAIQILTKYFDEFTKK
HYDKIQRGLSITEEQLKGAIGAIIRLNPKPGGGVGEVNKAMSYIVPDFFIFNNNGELELS
LNAKNAPDLRISDGYRDMLRDYEKGNKKDKRQKEAILFIKQKIDSAKWFIDMIKQRQHTL
LSTMGAIMEYQEEFFKTGDETTLKPMILKDIAEMIDLDISTVSRVANSKFVQTEFGTYRL
KFFFSESLSTESGEEVSTREVKKILSDVIDEEDKQKPFSDEKLTEILQEKGYNIARRTVA
KYREQLNIPVARLRIQL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaagtcaaacaatacaacaaaagttattacaaaagttatctccacaacagatt
cagttgatgaagttgttgcagatcccgaccgctaatctggaagaaagaatcaaagaggag
ttggaagagaatccggcgctcgaagagagcggtgaagaagatgtccatgatgagttagag
actccggcagatgaatatgagcaggagactgatgatgattttgaacccgatggaagcgag
caggaatatgagaatatagatatttctgagtatgtcaatgagggggatgatgagatcgct
gactataagctccggtcggacggttatcaggaggctgaagacaagcaaaatatacctttt
aaggtggaaagcagcctacacgagacattaaagtcacagttagggatgttgtctctggac
gataaagaatataccattgcagagcagatcatcggtagtattgacgatgacggatatctt
cgccgggaattggcttctatcgtcaatgatctggccttccgacagaatattgacgccacg
gaggaacaggtagaatcaattattcagaagatacagcagttcgatccggccggtatctgt
gcccgggatttgcaggaatgcttgttattgcaactcaatcgggcaggggcggaagcggat
gaacacacaaaagtcgccattcagatccttaccaagtattttgatgaatttaccaagaag
cattacgacaagatccagcgtggtctgtccataacggaagaacagctcaaaggcgcaatt
ggtgctatcatcagattgaatcctaagccgggcggtggtgtaggagaggtaaataaggct
atgagctatatcgttccggacttctttatttttaataataacggcgagcttgaactgtct
ctgaatgctaaaaatgcgccagacctgcgtatcagcgatggatatcgggatatgttgcgg
gactatgaaaaaggcaataaaaaagacaaaaggcagaaagaagctattttatttatcaag
cagaagatcgattctgctaaatggttcattgatatgatcaagcagcgccagcatacactg
cttagtacgatgggcgccattatggaatatcaggaggaatttttcaagacaggggatgaa
acgacactgaaaccaatgattttgaaagatattgctgaaatgatcgatctggatatttct
accgtgagccgggtagcgaacagcaaatttgtgcagacagaatttgggacctatcggctg
aagttcttttttagtgaatcgctcagtaccgaaagtggtgaggaggtaagtaccagagag
gtgaagaagatactcagtgatgtaatcgatgaggaagataagcaaaagcccttcagtgat
gagaaattaactgagatattacaagaaaaaggctataatattgcacgcagaactgtggcc
aaatacagagaacaactcaacattcctgtagccaggcttagaattcaattataa
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