Arachidicoccus terrestris: K9M52_08005
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Entry
K9M52_08005 CDS
T08223
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
atee
Arachidicoccus terrestris
Pathway
atee02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
atee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K9M52_08005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atee03021
]
K9M52_08005
Transcription machinery [BR:
atee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K9M52_08005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_Tnp_ISL3
HTH_23
HTH_40
HTH_11
TetR_C_19
HTH_28
HTH_DeoR
RGS-like
wHTH_Par
HTH_10
HTH_5
UPF0122
HTH_30
DUF6930
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
UAY56918
LinkDB
All DBs
Position
complement(1988668..1989246)
Genome browser
AA seq
192 aa
AA seq
DB search
MTIDTMFIEKLKADCPKAFETVYNTYAPQLINYSAARLSSLEESRDLVHDVFVSFYERRA
TLDLNVSVRTYLFAALKYKMIDHIRKNTHRKYYKEMVLSMDQHTEESVFDQTVYNNLNCI
MDQEVSRLPGRMRETFILSRQHHLSVTEIAAEMRVSEQTVKNQLSTALKKLRVVLNRIAL
IPLLIWLLGSTL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgatacaatgtttatagagaaattaaaggctgattgccctaaggcgtttgaa
actgtttataatacttatgcgcctcagctcatcaactatagtgccgcccgcttatcttca
ctggaggaaagccgggaccttgttcatgatgtttttgtcagtttttatgagcgtcgggca
accctcgacctgaatgtttctgtcaggacctatctatttgctgctctcaaatacaaaatg
atcgaccatatccgtaagaatacccataggaaatattacaaggaaatggtgttgtcaatg
gatcagcatacagaagagagcgtattcgatcagacagtctataacaatctgaattgtata
atggatcaggaagtgagtcgcctgcccggccggatgcgtgaaacatttattctaagcaga
cagcatcatttgagtgtcactgagattgctgcagaaatgagggtctccgaacagacggtt
aaaaatcaattatctaccgctttgaagaaactaagggttgttttaaataggatcgcattg
atcccattattaatatggctgttaggcagcacgctgtag
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