Arachidicoccus terrestris: K9M52_08970
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Entry
K9M52_08970 CDS
T08223
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
atee
Arachidicoccus terrestris
Pathway
atee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K9M52_08970 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atee03021
]
K9M52_08970 (rho)
03019 Messenger RNA biogenesis [BR:
atee03019
]
K9M52_08970 (rho)
Transcription machinery [BR:
atee03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K9M52_08970 (rho)
Messenger RNA biogenesis [BR:
atee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K9M52_08970 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA
AAA_22
AAA_25
OB_RNB
ATPase_2
AAA_16
Spore_III_AA
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
UAY57101
LinkDB
All DBs
Position
complement(2279409..2281229)
Genome browser
AA seq
606 aa
AA seq
DB search
MYDILQLNDMLVPELLKIAEQLKVKVPASKKNDKQDLIYKILDKQAVDESEDKKAGEKKK
PGRKRTVKATTGNTTEDAEVMSDEPEQDAKPRKRARKTVKKAPVAKAEKKEDAEHQEKVG
VKLEAKKETKAPASRPAGAKKTEEESSAPASKTKTATAAATESAGKTPSTNKDTDLLNDN
DIPKISDAFLALLSNDEGDISVEELEKIDEADLIPPTVNDRRPKFQKKEPVFNIEFDGII
LSEGVLEMMPDGYGFLRSSDYNYLSSPDDVYVSPSQIKLFGLKTGDTVYGSVRPPKEGEK
YFALLKVETINGKSPDEVRDRVPFDYLTPLFPFEKLNLYQSPINYSTRIMDLFTPIGKGQ
RGLIVAPPKVGKTVLLKEVANAIAANHPECYLMVVLIDERPEEVTDMERSVKAEVIASTF
DEPAEKHVKVSAMALQKAKRLVECGHDVVILLDSITRLARAHNTVAPASGKVLSGGVESN
AMQKPKQFFGAARKIEHGGSLTILATALVDTGSKMDEVIFEEFKGTGNMELLLDRRLANR
RIFPAIDIVASSTRRDDLLISKEVLSRINVLRVYLGDMKTEEAMNDLLKQMRGTKSNEEF
LASMNG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacattttgcaattaaatgatatgttggttccggaattgctcaaaattgcggaa
caactaaaagtaaaagtacctgcctcgaaaaaaaacgacaaacaagatcttatatacaaa
atcctggacaaacaggccgtagatgagagcgaagacaaaaaagcaggggaaaagaaaaaa
cccggcagaaaaagaaccgttaaagctacaacgggaaacactactgaagacgctgaagta
atgagcgatgaacctgaacaggacgccaaaccacgaaagagagcacgcaaaaccgttaag
aaagctccggtggctaaagcggaaaagaaagaagacgcagagcaccaggaaaaagtcggt
gtgaaactggaagcaaaaaaagaaacaaaagcacctgccagcaggcctgccggagccaaa
aagacagaggaagagtcctcagccccggcctccaagacaaaaacagcgactgctgctgcc
acagaaagcgccggaaaaacaccctccactaataaagatactgacttgctaaacgataac
gatattcctaagatctctgatgcctttttggctttattgtccaatgatgaaggagatatt
tctgtagaagaactggaaaagattgatgaagctgatctgattcctcccacggtaaatgac
cggcgtcctaagtttcagaaaaaggaaccggtattcaatattgaatttgacggtattatt
ttaagtgaaggtgtgctggaaatgatgcctgacgggtatggatttttgcggtcttctgac
tacaattatctgtcatctccggatgacgtatatgtttctccttcacagattaaattattt
ggcctgaaaacaggagatacggtttacggttccgttagacctcccaaagagggagaaaaa
tattttgcgctcttaaaagttgaaactattaatggcaagagcccggacgaagtgcgtgac
agagttccgtttgattatctgacaccgctgttcccgttcgaaaaactgaatctgtatcaa
agcccgatcaattacagtacacgtatcatggacttgtttacgccgattggtaaaggacag
cgcggtcttatcgtagctccgccaaaagtgggtaaaaccgtactgttgaaagaagttgcc
aatgccatcgccgccaatcatcccgaatgttatctgatggtcgtcctgattgacgagcgc
cctgaagaggtgacagatatggagcgtagtgttaaggcagaagtcatcgcctctaccttt
gacgagccggctgaaaaacatgtaaaggtgtctgctatggcactccagaaagccaagaga
ttggttgaatgcggacatgacgtagtgatattactggatagtattacccgcctggccaga
gcccataatacagtagctcctgcttccggtaaggtgctttccggtggtgtggaaagtaat
gctatgcaaaagcctaaacaattctttggtgccgcacgtaaaattgagcatggcggttca
ctgacgatcctggccacagcactggttgataccggcagtaagatggacgaggtgatcttc
gaagagtttaaaggtactggtaatatggagttgttgctggatagaaggctggccaatcgc
cgtatcttcccggccattgatattgttgcttcttctaccagaagagatgacttactcatc
agcaaagaagtgctttcccgtatcaatgtacttcgtgtttacttaggagatatgaagacg
gaggaagcgatgaatgacctcttgaagcaaatgcgtggaacgaagagtaacgaagaattc
ctggcttcgatgaatggttaa
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