Arachidicoccus terrestris: K9M52_14595
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Entry
K9M52_14595 CDS
T08223
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
atee
Arachidicoccus terrestris
Pathway
atee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K9M52_14595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atee03019
]
K9M52_14595
03009 Ribosome biogenesis [BR:
atee03009
]
K9M52_14595
Enzymes [BR:
atee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K9M52_14595
Messenger RNA biogenesis [BR:
atee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K9M52_14595
Ribosome biogenesis [BR:
atee03009
]
Prokaryotic type
rRNA helicases
K9M52_14595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Ig_SibA
Motif
Other DBs
NCBI-ProteinID:
UAY54662
LinkDB
All DBs
Position
3747534..3749225
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AA seq
563 aa
AA seq
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MITFEQLGLDDRLVKATSELGYIHPTPIQEKAIPVLLGGTRDLIGLAQTGTGKTAAFSLP
LLSIIKEDKKYPQALIVCPTRELCLQIVKEIVGFKKFMKEISVVAVYGGASISLQIRDIK
RGVQIIVATPGRLIDLIERKAVNLEKIQYVVLDEADEMLNMGFQDDIEFILKNTPIREST
WLFSATMPPAIRKVSKKYMDNPEEITVGKANTVNTNIDHQYYVTSAQHRYETLKRLIDFN
PGIYGIIFTRTKADAQQIAEKLTREGYDIDALHGDLTQPQRDRVMKQFRDRSLQLLIATD
VAARGIDVKEITHVINYELPDDVEVYTHRSGRTGRAGSTGICISIIHSRESYRLKQIQKI
VQAPFNKLEIPSGKDVCRKQFFYFMDRLLKADVSHGDYESYVPMLEEKFSDISKEEVLKR
VAALEFDRFLQYYENAGDLNVRANDNKGDRRDRQSGGSGRDRDRSDRGSRNGRRDSRDFQ
GDTTRLFINIGTKDGFYKASFLQFILDMSDLRKDVLGRIDMKEMNSWVEIDKRAAVQMIR
SLDGKKFKGRKIRMNDAETGGRR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgattacatttgaacaactgggactggatgatcgtttggtaaaggctaccagcgaatta
ggatacatccacccaacgccaatacaggaaaaggcgattccggtattacttggcggcaca
agagatctgatcggtctggcacagaccggaacaggtaaaacagcagcattttccttaccg
ctgctcagtattattaaggaggataagaaatatccgcaggcccttattgtttgtcctacg
cgtgagctatgcttgcaaattgtaaaggagattgtcggatttaaaaaattcatgaaagag
atcagtgtcgtggctgtttatggaggagcttccattagtttacagattcgcgatattaaa
agaggggtgcagattattgttgcgactccgggaaggcttattgatctgatcgaaagaaag
gcagtgaacctggaaaaaattcaatacgttgtactggatgaagccgatgaaatgctaaac
atgggcttccaggacgatattgagtttatcctgaaaaacacgcccatcagggaaagtacc
tggctgttcagtgccacgatgccaccagccatacgcaaggtgtccaaaaaatatatggat
aatccggaagagatcactgtcggtaaggctaatacggtcaatacaaatattgatcaccag
tattacgtgacttctgcgcagcaccgttatgaaactttaaaacggctgatagattttaac
ccgggtatatacggaatcatctttacccgtaccaaggcagatgcccagcagattgctgaa
aaattaacccgcgaaggatacgatatcgatgctttgcatggcgatctgacacaaccacaa
cgggaccgtgtcatgaagcagttcagagaccggagtctgcagctcctgattgctacagat
gtagcggccagagggattgatgtaaaagaaattacacacgttatcaattatgaactaccg
gatgacgtagaagtatatacacatagaagcggccgtactggccgcgctggttctaccggt
atctgtatcagtattattcattccagggaaagctatcgcttgaagcagattcagaaaatt
gtacaggcccctttcaataaattggaaatcccatccggaaaagatgtatgccgcaaacag
tttttctattttatggaccggctgctgaaagcagatgtgtctcatggagattatgaatcc
tatgtgcctatgctggaagagaagttttccgatatttctaaggaagaagttttaaaaagg
gtagcggcactggaatttgaccggtttttgcaatattatgaaaatgcgggtgacttgaat
gtgcgggctaatgataacaaaggcgatagaagagacagacagtcgggtggcagtggtaga
gacagagatcgtagtgatcgtggcagccgtaatggaagaagagacagccgcgattttcaa
ggagacacaacaagactctttattaatattggcacaaaagacggcttttataaagccagc
ttcctgcagttcattctggatatgagtgaccttagaaaggatgtattggggcgcattgat
atgaaagaaatgaactcatgggtggagatcgataaaagagcagcggtgcaaatgatccgc
tctctggatggcaaaaagttcaaagggcgtaagatccgtatgaatgatgcagaaacaggt
ggtcgccgttaa
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