Arachidicoccus terrestris: K9M52_15655
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Entry
K9M52_15655 CDS
T08223
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
atee
Arachidicoccus terrestris
Pathway
atee03030
DNA replication
atee03430
Mismatch repair
atee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K9M52_15655 (dnaE)
03430 Mismatch repair
K9M52_15655 (dnaE)
03440 Homologous recombination
K9M52_15655 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atee03032
]
K9M52_15655 (dnaE)
03400 DNA repair and recombination proteins [BR:
atee03400
]
K9M52_15655 (dnaE)
Enzymes [BR:
atee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K9M52_15655 (dnaE)
DNA replication proteins [BR:
atee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K9M52_15655 (dnaE)
DNA repair and recombination proteins [BR:
atee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K9M52_15655 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF1836
Motif
Other DBs
NCBI-ProteinID:
UAY54861
LinkDB
All DBs
Position
complement(3993381..3997052)
Genome browser
AA seq
1223 aa
AA seq
DB search
MPQFSHLHVHSQYSLLDGAASIGHLYKKAESDGMKALALTDHGNMFGAFEFVAQAWNNTK
VIGKDANGKDIVTPKIKPIVGCELYVVEDRFQKTFTKEKKDRRYHQILLAKNDLGYRNLI
KITSMGFIEGLYGKYPRVDKSLIAKHHEGLIATTCCLGASVPQAILTGGEEEGEKEFKWW
LDLFGDDYYVELQRHNIPEQDKVNLVLLKLAKKYNVPVICTNDSHYTNQEDANAHDILLC
INTGEKQTTPGFDDFVNDDAIIKNRRFKFPNDQFYFKTTAEMEQVFKDIPQSLENTQGIV
DKIEVLNLKKDILLPAFPIPEEFKTTQDSNINQWNYLHYLTYEGARQRYSEITEEIRERL
DFELFTIKTMGFAGYFLIVSDFIKAGRDLGVFIGPGRGSAAGSVVAFCIGITNIDPIKYN
LLFERFLNPDRKSMPDIDTDFDDEGRQKVINYVVEKYSKQQVAQIITYGTMAAKMSIKDV
ARVLDLPLAESNTLAKLVPDKPGTKLSRVLKAPITAAEAKDGQKSLAEKEGYAPEDIENI
KKIREIYNGDDLRAQVLHEAERLEGSVRNTGIHAAGIIIAPKDLTELIPVSVAKDSDLWV
TQIEGSSIESAGVIKMDFLGLKNLSIIKTALNLIKQNYDRDIEIDYIPLDDEKTFEIFQK
GETNAIFQFESAGMQKNLRELKPDVFADLIAMNALYRPGPIAYIPDFIKRKHGEQEITYD
LPEMEEYLADTYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMGKKQISVLDKMKAQFVE
GASKKGHPKDKLDKIWKDWEAFAQYAFNKSHSTCYAFVAYQTAYLKAHYPSEYMAAVLNH
AGAIDKITFFMEECKRMGIGVLGCDINESQKGFAVNKNGEIRFGFGGLKGMGDAAIDGVI
EERTQNGPYKDIFDFIQRINQRVVNKKALESLVYAGAFDCFSDLHRGQYFAVQTGEVVNN
LERIIKFGNVVQTSKTSSMGSLFGEATMPEIATPKILPCDKWSLIEKLEHEKDVTGIYIS
GHPLDNFRFEMKHYGIMPLNDFEAMRMDANPKTGVNFRIAGMVVGAQHRQTKKGMDFGVL
ALEDYSGKTELMLWREDYLNFKNFVEPGLMLSITGHFKQRFNTGQYEFKISSISLMESLK
SALTKSLDMEMPLKEVTHDLVNFLEENINKHPGNATLKFKVIDFEQQASVNLYTLDKGIS
LNDELIDYLNSHPDIHVQIGLTG
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaattttcgcacttacatgttcattctcaatattctctattagatggagccgcc
tcaatcggacatctctataaaaaagcggagtctgacggcatgaaagcattggcgctcacc
gatcatgggaacatgttcggtgcttttgagttcgtcgcccaggcctggaacaatacaaaa
gtcattggaaaggatgccaacgggaaagacattgtaaccccaaaaatcaaaccgattgta
ggttgtgaactctatgttgtggaagaccggttccagaagacttttacgaaagaaaagaag
gaccgccgttatcaccagattctactggccaaaaatgatctgggttatcgcaacctgatc
aaaatcacttctatgggctttattgaggggttgtacggcaagtatcccagggtcgataaa
agtctgatcgcgaaacatcatgagggattaattgccactacttgctgcctgggcgcttcc
gtgcctcaggctattttgaccggtggagaagaagaaggcgagaaggagtttaaatggtgg
ctggacctatttggtgatgattactatgtagagctgcaacgtcacaacatacctgaacag
gataaagtaaacctggtattgctgaaactggctaaaaaatacaacgtaccggtcatctgt
actaatgacagccactataccaatcaggaagacgccaatgcccacgatattctgctttgt
attaatacaggagaaaagcaaaccacgccggggttcgatgactttgtcaatgatgacgct
atcattaaaaacagaagatttaaatttcccaatgaccagttttattttaagacaactgca
gaaatggagcaggtctttaaggacatccctcagtcactggagaatacccagggcattgtg
gataaaattgaagtgctaaatcttaaaaaagatattctgcttccggcgttccccattccg
gaagagtttaaaacaacacaggacagtaatattaatcagtggaactatctgcattatctt
acctatgaaggagccagacaacgttacagcgagattaccgaggaaatccgtgagcggctc
gattttgaattatttacgattaaaacaatgggatttgcgggttacttcttaatcgtaagt
gattttatcaaagcaggcagagacctgggcgtatttatcggccccggccgtggctctgct
gctggcagtgtggtcgcgttttgtattggcattaccaatatagatccgatcaaatataat
cttctttttgagcgttttttaaatccggatcgtaaatccatgccggatatcgatactgat
tttgatgatgagggcagacagaaagtaatcaactatgtcgtagagaaatactctaaacaa
caggtagctcagattattacttatggtacaatggcagccaaaatgtctatcaaggacgtc
gccagagtgttggatctcccgcttgctgaatccaatacgctggcaaagttggtgcctgat
aaacccggcaccaagctcagtcgtgttctaaaggcgccgatcactgcagcagaagcaaag
gatggacaaaaatcactcgcagaaaaagaaggatatgcaccggaagatatcgagaatatc
aaaaagatccgggagatatataacggtgatgatttaagggcacaagtattacatgaagct
gaaaggttggaaggaagtgtacgtaatacaggcatccatgcggcaggtatcattattgca
ccaaaagatctgacagagttgattcctgtatccgtagccaaagattccgacctatgggta
acacagatcgaaggaagtagtattgaatccgccggggttattaagatggacttcctgggc
cttaaaaacctgtccatcattaagactgctttaaacctgatcaagcagaattatgataga
gatattgaaattgattatattccgctggatgacgagaagacatttgagattttccagaaa
ggggagaccaatgctatcttccaatttgaaagtgccggcatgcaaaagaatctccgggag
cttaaaccggacgttttcgccgacctgatcgcgatgaatgccttataccgtccgggtccg
attgcctatataccggatttcatcaaacgtaaacatggagaacaggaaatcacttatgat
ctccctgagatggaagaatatctggccgatacgtatggcattactgtctatcaggaacag
gtaatgctgctctcccagaaactggccggcttctctaaaggggatgcagatgttctgcgt
aaagccatgggtaaaaagcagatttctgttctggacaaaatgaaagcgcagtttgttgaa
ggggcttccaaaaaaggacatcccaaggacaaattagacaaaatctggaaagactgggaa
gctttcgcgcaatatgccttcaacaaatcacattctacctgttacgctttcgtggcttat
cagacagcatatttaaaagcacactatccgagtgaatatatggccgccgtactcaaccat
gcgggtgcgatcgacaagatcaccttttttatggaggaatgtaaaaggatgggcattggt
gttctgggatgcgatattaatgaatcccaaaaaggctttgccgtaaataaaaacggagag
atccgctttggatttggcggcttgaaaggtatgggagacgccgccattgacggagttatt
gaggaaagaacacaaaacggcccctataaagatatcttcgattttatccagcgcattaat
caaagagttgtcaataaaaaagcattggaaagcctggtatatgcaggcgcctttgattgt
ttctccgacctgcacagaggtcaatattttgcggtgcagacaggggaggtcgttaataac
ctggaaaggatcattaaatttggcaacgtggttcagaccagtaaaacaagctccatgggc
agtttatttggtgaagccaccatgccggaaatcgctacgccgaaaatattaccttgtgac
aagtggtcattaattgaaaaattagagcatgaaaaagatgtaacgggtatttatatcagt
ggacatccattagacaatttccggttcgaaatgaaacattatggtattatgccactcaat
gattttgaagccatgcgcatggatgccaatccaaaaacaggtgtcaatttcagaattgct
ggcatggtggttggcgcacaacaccggcagacaaaaaaggggatggacttcggcgtactg
gctcttgaggattattccggcaaaacagagcttatgctctggcgggaagactatctcaac
ttcaaaaattttgtcgagccagggcttatgctcagtataaccggacattttaagcaaaga
ttcaacacaggccaatatgaatttaagatatcttctataagcctgatggagtcccttaaa
tcagcgctcacaaaatcgctggatatggagatgccattaaaagaagtcactcatgacctg
gtcaatttcctagaggagaacattaataaacaccccggaaacgctacccttaaattcaag
gtgatcgactttgagcaacaggcatccgtcaacctatatacactggataaaggaatcagc
ctgaatgatgaactgattgactacctgaatagccatccggatatacacgttcagataggc
cttaccggttaa
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