Arachidicoccus terrestris: K9M52_17680
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Entry
K9M52_17680 CDS
T08223
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
atee
Arachidicoccus terrestris
Pathway
atee03030
DNA replication
atee03430
Mismatch repair
atee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K9M52_17680
03430 Mismatch repair
K9M52_17680
03440 Homologous recombination
K9M52_17680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atee03032
]
K9M52_17680
03400 DNA repair and recombination proteins [BR:
atee03400
]
K9M52_17680
Enzymes [BR:
atee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K9M52_17680
DNA replication proteins [BR:
atee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K9M52_17680
DNA repair and recombination proteins [BR:
atee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K9M52_17680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
DUF7508
R2K_2
Motif
Other DBs
NCBI-ProteinID:
UAY55219
LinkDB
All DBs
Position
complement(4512171..4513562)
Genome browser
AA seq
463 aa
AA seq
DB search
MEYAIVDIETTGGHASGCGITEVAIVLHNGQEVIGRYETLVNPGVPVPVYITALTGINNS
MIATSPSFDQVADKIYNLLQGRIFVAHNVNFDYSFIKYHLAEAGYNYSATKLCTVRMSRK
IKPGLSSYSLGRLCAALEIPLVDRHRAGGDADATAILFSRLLEWDNKGVIMGMLKKGAGD
QTLPPNLPKTDFEALPHSPGVYYFKDDKGKVIYVGKAKDLRKRVAQHFTGHNPNPQRQNF
LRCIHHISFESCGTELIAFLLEALEIKRLWPKYNRAMKKYEPKFGLFVYEALDGYLRMAI
GKFNKSQTAELVFSHLVEASNVLHEMVHEFDLCPELCRLGNCSSEGGCKTKGGLCPRKTD
PEYYNDLVREALQEYRKQLPTFVIIDKGRTENEQSCIYVEKGHFCAMGYIHKDTDLTQIE
DAKKLLKLYQGNHYIMQLIYSYAKTFPEKVLMKEYEMWDNMHN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgcaattgttgatattgaaacgactggcggtcacgcttccggatgcggtatt
acggaggttgccattgttctgcataacggacaggaggtcatcggacgatatgaaaccctc
gtcaatcctggcgtacccgtacccgtgtatattacggctcttaccggcatcaataatagc
atgatcgccaccagcccttctttcgaccaggtagcagataaaatatacaacctgcttcaa
ggcaggatctttgttgcacataatgtcaattttgattactcctttatcaaatatcatctg
gcagaagctggctataattatagtgctaccaaattgtgtactgtgagaatgagccgtaaa
attaagccagggttatcatcctatagcttaggcaggctctgtgctgctcttgagatacct
ctggtagaccggcatagagcgggtggggatgcggatgcgaccgcgatattgttctcaagg
ctgctggaatgggataacaaaggtgtaataatgggtatgcttaaaaaaggagcaggagat
caaacgctacccccaaatttacccaaaactgattttgaagcgttgccacacagccctgga
gtatactattttaaagacgacaaagggaaagtaatctatgtaggtaaggcaaaggacctt
cgtaagcgggtcgcccaacactttaccggtcataatcccaatccccaacgccagaacttc
ctgcgttgtatccatcacattagttttgaaagctgtggaaccgagctcatagctttcctg
ttggaagcgctagaaataaaacggctctggcccaaatataaccgggccatgaaaaaatat
gaaccaaaattcggtctttttgtctatgaagcactagatggttatctccgcatggctatc
ggcaaattcaataaaagtcagacagcagaattggtcttctcacacctggtagaagcctct
aatgtgctccacgaaatggtacacgagtttgatctctgtccagagctctgcaggcttggc
aattgcagtagcgaagggggctgtaagaccaaaggtggactttgtccccgcaaaacagac
ccagaatattataatgacctcgtcagagaagctttacaggagtaccgcaagcaactgcct
acctttgtcattattgataaaggcagaacagaaaatgaacagagctgtatctatgtagaa
aagggacatttttgtgccatgggctatatacataaggatacagatctgactcagatagaa
gatgccaaaaaactgctcaagctatatcagggcaatcactatataatgcaactaatttac
agctatgccaaaacctttccggagaaagtgcttatgaaggaatatgaaatgtgggacaac
atgcataactaa
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