Acidovorax temperans: PQV96_00555
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Entry
PQV96_00555 CDS
T08827
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
atem
Acidovorax temperans
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atem03000
]
PQV96_00555
Transcription factors [BR:
atem03000
]
Prokaryotic type
Helix-turn-helix
Other families
PQV96_00555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
Sigma54_activ_2
GAF
AAA_lid_14
PAS
AAA_5
HTH_7
Mg_chelatase
AAA_16
HTH_30
HTH_29
Xre-like-HTH
Phage_CP76
HTH_28
HTH_23
AAA_2
HTH_17
PAS_9
nSTAND6
HTH_22
PAS_8
HTH_psq
nSTAND3
AAA_3
AAA
Motif
Other DBs
NCBI-ProteinID:
WCT24601
LinkDB
All DBs
Position
124171..126261
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AA seq
696 aa
AA seq
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MRTTPSPLLALQQARRHLLEHGHCPTGLVDERLARSWRRSMAAGLAPAGRAAADLPSPGE
LREAMACNHSLLTHSRPIMEYLFDQVRHSHSVVVLADRAGMLMHTLGSPGFVDKAERVAL
TCGASWHESHRGTNAIGTALAEGTAVEVHGGEHFLERNSFLTCAASPILSATGELLGILD
ISGDHRNGHSHTLGLVSTAARMIENRLLVATCKRHIRLHLHREPEGIGSVAEGVLAVSPD
GWIVGANRAALAQLGLRRDDVGATPLAQVLDARLDDLLSHHRRRPQQPLPVRERGGSLLF
ALVQVDAALWPGARSADSAGALRLPAQAMADASAPPADALAQLDTGDARWRAAADKARRV
AGKPIAVLIQGESGVGKEVFARALHASSPRQGGPFVAINCAAIPENLIEAELFGYVPGAF
TGARKQGSPGRLREAHGGTLFLDEIGDMPLALQTRLLRVLQERSVTPVGGSQAVPVDFAL
VSATHCQLMQAAEQGRFRQDLYYRLNGLTVQLPALRERSDFLPLTERLLADLTSEQALPQ
PAQLAPELIAPLAAYPWPGNLRQYASALRTACALLAEGEDTITWSHLPDDLQHALHAAQT
APIAPSAGHGHQEAARSELPAARPVTTLPGVAVLHAAGGAGASAVSPLNLQQLSRTAIDQ
AVQAAGGNMSQAARTLGISRQTLYRKLAARQDAAHP
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaccaccccatcccccctgctggccttgcaacaggcccggcgacatttgctggaa
cacggccattgccccacgggcctggtggatgagcgcctggcccgttcctggaggcgcagc
atggccgcaggcctggcccctgccgggcgcgcagcggccgatttgcccagccccggcgag
ctgcgcgaagccatggcctgcaaccacagcctgctcacgcattcgcgccctatcatggaa
tacctgttcgaccaggtgcgccacagccacagcgtggtggtgctggccgaccgggccggc
atgctcatgcacacgctgggcagccccggctttgtggataaggccgagcgcgtggcgctg
acctgcggcgcctcgtggcacgaatcccaccggggcaccaacgccatcggcacggcactg
gccgaaggcacggcggtggaagtgcacggcggcgagcattttctggagcgcaacagcttt
ctcacctgcgcggcctcgcccatcctctcggccacgggcgagctgctgggcatcctcgac
atctcgggtgaccaccgcaacggccactcccacaccctgggcctggtcagcactgcggcc
cgcatgatcgaaaaccgcctgctggtggccacctgcaagcgccacatccggttgcacctg
caccgcgagcccgaaggcatcggcagcgtggccgagggcgtgctcgccgtctcgcccgat
ggctggatcgtcggcgccaaccgcgccgccctggcgcagctgggcctgcgcagagacgat
gtgggggccaccccgctggcccaggtgctggatgcgcggctggacgacctgctctcgcac
caccgccgccgtccccagcagcccctgcccgtgcgcgagcgcggcggcagcctgctgttt
gccctggtgcaagtggacgcggcgctgtggcctggggcgcgttctgcggactctgcgggc
gccctgcgcttgcccgcccaggccatggccgatgcatcagccccccccgccgacgccctg
gcgcagctggacaccggcgacgcccgctggcgcgccgccgccgacaaggcccggcgcgtg
gcgggcaaacccattgccgtgctcatccagggcgaatcgggcgtgggcaaggaagtgttt
gcgcgggccctgcacgccagcagcccgcgccagggcggcccctttgtggccatcaactgc
gccgccattcctgagaatttgatcgaggcagagctgtttggctacgtgcccggggccttt
accggcgcgcgcaagcagggcagcccgggccgcctgcgcgaggcgcacggcggcacgctg
tttctggacgaaatcggcgacatgcccctggccctgcaaacccgcctgctgcgcgtgctg
caagagcgcagcgtgactcccgtgggcggcagccaggccgtaccggtggactttgccctg
gtcagcgccacgcactgccagctcatgcaggcggcagagcagggccggtttcggcaagac
ctgtactaccgcttgaacggcctcacagtgcaattgcccgccctgcgcgagcgcagcgac
tttttacccctcacggagcgcctgctggccgacctgacctccgagcaggccttgccccag
cccgcgcaactggcccccgagctgatcgccccgctggccgcctacccctggcccggcaac
ctgcgccaatacgccagcgccctgcgcaccgcctgcgccctgctggccgagggcgaagac
accatcacctggagccacctgcccgacgatttgcagcacgcgttgcacgcggcgcagacc
gcgcccatcgcaccttctgcagggcatgggcaccaagaggctgcgcggtcagaactgccc
gcagcccgccccgtcaccacgttgcccggtgtggcggtgctgcatgccgccgggggggct
ggcgcgagtgccgtatcgcccctcaatctgcagcaactctcccgcaccgccatcgaccag
gcggtgcaggccgcgggcggcaacatgtcgcaggcggcgcgcacgctgggcatcagccgg
caaacgctgtaccgcaagctggcggcccgccaggacgcagcacatccttga
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