Acidovorax temperans: PQV96_00580
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Entry
PQV96_00580 CDS
T08827
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
atem
Acidovorax temperans
Pathway
atem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PQV96_00580 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atem03400
]
PQV96_00580 (uvrA)
DNA repair and recombination proteins [BR:
atem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PQV96_00580 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PQV96_00580 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_23
nSTAND1
RsgA_GTPase
nSTAND3
DnaJ_CXXCXGXG
HUTI_composite_bact
AAA_21
BCA_ABC_TP_C
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WCT24606
LinkDB
All DBs
Position
complement(130362..133466)
Genome browser
AA seq
1034 aa
AA seq
DB search
MVGFLALRDLPPVTDSSAPTSPADGTYLARALREQRISIRGARTHNLKNIDLDIPRNQLV
VITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGRLDKPDVDLIEGLSPAISIEQ
KATSHNPRSTVGTVTEIHDYLRLLYARAGTPFCPDHGLPLAAQTVSQMVDAVLALPEDTK
LMILAPVAREKKGEFTELFAQMQALGYIRFRVDGQIYEHENLPQLKKTEKHDIDVVIDRV
KVRADLQQRLAESIEAALRVGGHDGNGRVLALEMDTGQEHLFSSKFACPVCSYSLAELEP
RLFSFNSPMGACPACDGIGQREVFDPVRVVAFPSLSLASGAIKGWDRRNGYYFAMLESLA
KHYAFDIEAPFESLPAPVQHAILHGSGEEEIAFSYILDSGAQKGKTVTKKHPFEGIIPNM
ARRYRETDSVVVREDLARFRSTQPCPECHGVRLRREARHVKVGEGEQARAIYEVSHATLS
DAHAWFQALRLTGAKAEIADKVVREIATRLQFLNDVGLSYLSLDRSAETLSGGEAQRIRL
ASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIATLQHLRDIGNSVIVVEHDEDMMRAADHV
IDMGPGAGVHGGRVMAQGTYDEVRANAQSLTGQYLSGTRTIAVPKRRTPWLPVLDQPAPV
VETKAKSRFPQTEASKRRAEQKAERLAEHHARQGAVQALRVVGATGNNLKGVTVDFPVGL
LTCVTGVSGSGKSTLVNDTLYAAVARQIHRAHEEPAEHEEIVGIEYFDKVINVDQSPIGR
TPRSNPATYTGLFTPIRELMAETNTAKERGYGPGRFSFNVSQSSGGGRCEACQGDGVVKV
EMHFLPDVYVPCDICHGQRYNRETLEVLWKGKNIAQILELTVEDAAAFFQDVPTIARKLQ
TLLDVGLSYIRLGQAATTLSGGEAQRVKLAQELSKRDTGRTLYILDEPTTGLHFADIDLL
LKVLHQLRDAGNTIVIIEHNLDVIKTADWLIDMGPEGGAGGGTVVGVGTPEELAANPASH
TGRYLAPYLRSKFE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttttcttgccctccgcgacttgccgcccgtgaccgactcttctgcccccaca
tcgcccgctgacggcacctacctcgcccgcgccctgcgcgagcagcgcatcagcatccgt
ggcgcgcgcacgcacaacctcaagaacatcgacctcgacattccgcgcaaccagctggtg
gtgatcacggggctgtccggctcgggcaaatccagcctggcgtttgacacgctgtatgcc
gagggccagcggcggtatgtggagagcctgtcggcctatgcgcggcagtttctggggcgg
ctcgataagcccgatgtggacctgatcgagggcctgtcgcccgccatcagcatcgagcag
aaggcgaccagccacaacccgcgctccaccgtgggcacggtgacggagattcacgactac
ctgcgcctgctctatgcccgcgcaggcacgccgttttgccccgaccacggcctgccgctg
gcagcgcaaacggtgagccaaatggtggacgccgtgctggcgctgcccgaggacaccaag
ctcatgatcctcgccccggtggcgcgggaaaagaagggcgagttcaccgagctgtttgcg
cagatgcaggcgctgggctacatccgctttcgggtggatggccagatttacgaacacgag
aacctgccgcagctcaagaagaccgagaagcacgacattgacgtggtgattgaccgcgtg
aaggtgcgtgccgacctgcagcagcgcctggccgagagcattgaagcagcgctgcgggtg
ggcggccacgacggcaatggccgcgtgctggcgctggagatggacacggggcaggagcac
ctgttcagcagcaagtttgcctgcccggtgtgcagctactcgctggccgaactggagccg
cgcctgttctcgttcaactcgcccatgggtgcgtgccccgcgtgcgacggtatcgggcaa
cgcgaggtgtttgacccggtgcgcgtggtggccttcccgtcgctcagtctggccagcggt
gccatcaagggctgggaccggcgcaacggctactactttgcgatgctggagagcctggcc
aagcactacgcctttgacatcgaggcgccgtttgaatcgctgcctgcgccggtgcagcac
gccatcctgcatggctcgggcgaggaggaaattgctttcagctacatcctcgacagtggc
gcgcagaagggcaaaaccgtcaccaagaagcaccccttcgaaggcatcatccccaacatg
gcccgccgctatcgcgagacggattcggtggtggtgcgcgaagacctggcgcgctttcgc
agcacccagccctgccccgaatgccacggcgtgcgcctgcgccgtgaggcccgccatgtg
aaagtgggcgaaggcgagcaagcccgcgccatctacgaagtgagccacgccacgctgagc
gatgcgcacgcgtggttccaggccctgcgcctgacgggggccaaggccgagattgccgac
aaggtggtgcgcgagatcgccacgcgattgcagtttttgaacgatgtgggcctgagctac
ctgagcctggaccgcagcgccgaaacgctgagcggcggcgaggcgcagcgcattcgcctg
gcttcgcaaatcggctcgggcctgacgggtgtgatgtatgtgctggacgagcccagcatc
ggcctgcaccagcgcgacaacgaccggctgattgccacgctgcagcacctgcgcgacatt
ggcaacagcgtgatcgtggtggagcacgacgaagacatgatgcgcgccgccgaccatgta
attgacatgggccccggcgcgggcgtgcacggcgggcgggtgatggcgcagggcacgtat
gacgaagtgcgtgccaatgcgcagtcgctcacgggccagtacctttcaggcacgcgcacg
attgccgtgcccaagcgccgcacgccctggctgccggtgctggaccagcctgcgcccgtc
gtcgagaccaaagccaaatcacgctttccgcagactgaggccagcaagcgccgcgcagag
caaaaagccgagcgattggccgagcaccacgcccgccagggcgctgtgcaggccctgcgc
gtggtgggcgccacgggcaacaatttgaagggcgtgacggtggacttcccggtggggctg
ctcacctgcgtgacgggcgtctcgggctcgggcaagagcacgctggtcaacgacacgctg
tatgccgccgtggcgcggcagattcaccgcgcacacgaagagccggccgagcacgaagag
atcgtgggcatcgaatacttcgacaaggtcatcaacgtagaccaaagccccattggccgc
acgccgcgcagcaaccctgcgacctataccggcctgttcacgcccatccgcgagctgatg
gccgagaccaacaccgccaaggaacgcggctacggcccggggcgcttcagtttcaacgta
tcgcaatcgtcgggcgggggccgctgcgaggcctgccagggcgacggggtggtgaaggtg
gagatgcacttcttgcccgacgtgtacgtgccctgcgacatctgccacggccagcgctac
aaccgcgagacgctggaagtgctgtggaagggcaagaacatcgcccagattctggagctg
acggtggaggacgctgcggccttcttccaggacgtacccaccatcgcccgcaagctgcag
acgctgctggatgtgggcctgtcgtacatccgcctgggccaggcggccaccaccctctca
ggtggcgaggcgcagcgagtgaagctggcgcaggagctgagcaaacgcgacacgggccgc
acgctctacatcctggacgaacccaccaccggcctgcactttgccgacatcgacctgctg
ctcaaggtgctgcaccagctgcgcgatgcgggcaacaccatcgtcatcattgagcacaac
ctcgacgtgatcaaaacggctgactggctcatcgacatgggccccgagggcggcgcgggc
ggtggcaccgtggtgggtgtgggtacgcctgaggaactggccgccaacccggccagccac
acggggcggtatttggcgccgtatctccggtcaaaatttgaataa
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