Acidovorax temperans: PQV96_01380
Help
Entry
PQV96_01380 CDS
T08827
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
atem
Acidovorax temperans
Pathway
atem03030
DNA replication
atem03430
Mismatch repair
atem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PQV96_01380 (holA)
03430 Mismatch repair
PQV96_01380 (holA)
03440 Homologous recombination
PQV96_01380 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atem03032
]
PQV96_01380 (holA)
03400 DNA repair and recombination proteins [BR:
atem03400
]
PQV96_01380 (holA)
Enzymes [BR:
atem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PQV96_01380 (holA)
DNA replication proteins [BR:
atem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PQV96_01380 (holA)
DNA repair and recombination proteins [BR:
atem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PQV96_01380 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
CARD_2
Motif
Other DBs
NCBI-ProteinID:
WCT24754
LinkDB
All DBs
Position
308579..309634
Genome browser
AA seq
351 aa
AA seq
DB search
MQVALAQLSNHLQRALSPLYVLHGDEPLLQQEAADAIRATARTQGYTERSSYTVAGAHFD
WSAVLAAGGSLSLFADKQIVEIRIPSGKPGKDGSVALQQVAESARGNDSTLTMVMLPRLD
KATKTGAWFAALEGNGVSIQIDPIERGQLPQWIAQRLAQQGQRVVAGEEGQRTLQFFADR
VEGNLLAAHQEIQKLALLHPAGELTQAQVEAAVLNVARYDVFKLSESVLAGQTGRVQRML
DGLQAEGEAEVLVHWALAEDIRALKRVKDAMNAGRPLPMALRENRIWGPKERLFERILPK
ASDAALARLLQSAHIVDGIVKGLKQPDWPQDGWQALQRLAFQLCRLTSAAR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcgccctggcccaactttccaaccacctccaacgggccctgtcgccgctgtac
gtactgcacggcgacgagcccttgctgcagcaggaagccgcggacgccatccgcgccacc
gcccgcacccagggctacaccgaacgcagcagctacaccgtggccggtgcccactttgac
tggagcgccgtgttggcggcaggtggttcgctcagcctgtttgccgacaagcagattgtc
gaaatccgtatcccctcgggcaagcccggcaaggacggcagcgtagcgctgcagcaggtg
gccgaatcggcccggggcaacgacagcacgctcaccatggtcatgctgccgcgcctggac
aaagccaccaagaccggcgcctggtttgccgcgctggagggcaacggcgtctccatccag
atcgaccccatcgaacgcggccagttgccgcagtggattgcccagcgcctggcccagcaa
ggccagcgcgtggtggcgggcgaggaaggccagcgcacgctgcagttctttgccgaccgc
gtggaaggtaacctgctggccgcgcaccaggagatccaaaagctcgcgctgctgcacccg
gcgggtgaattgacccaagcccaggtcgaagccgccgtgctcaacgtggcgcggtatgac
gtgttcaagctgtccgaatcggtgctggccgggcagaccggccgcgtgcagcgcatgctc
gacggcctgcaggccgagggcgaggccgaggtgctggtgcactgggcgctggccgaagac
atccgcgccttgaagcgcgtgaaagacgccatgaacgccggccgccccctgcccatggcc
ctgcgcgaaaaccgcatctggggccccaaggagcggctgtttgaacgcatcctgcccaaa
gccagcgacgccgccctggcgcggctgctgcaatccgcccacatcgtggatggcatcgtg
aaggggctcaagcagcccgactggccgcaagacggctggcaggcattgcagcgcctggcc
tttcagctctgccgcctgaccagcgcggcgcgttaa
DBGET
integrated database retrieval system
