Acidovorax temperans: PQV96_05455
Help
Entry
PQV96_05455 CDS
T08827
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
atem
Acidovorax temperans
Pathway
atem00260
Glycine, serine and threonine metabolism
atem00460
Cyanoamino acid metabolism
atem00630
Glyoxylate and dicarboxylate metabolism
atem00670
One carbon pool by folate
atem00680
Methane metabolism
atem01100
Metabolic pathways
atem01110
Biosynthesis of secondary metabolites
atem01120
Microbial metabolism in diverse environments
atem01200
Carbon metabolism
atem01230
Biosynthesis of amino acids
atem01240
Biosynthesis of cofactors
atem04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PQV96_05455
09102 Energy metabolism
00680 Methane metabolism
PQV96_05455
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PQV96_05455
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PQV96_05455
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PQV96_05455
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PQV96_05455
Enzymes [BR:
atem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PQV96_05455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
WCT25468
LinkDB
All DBs
Position
complement(1163507..1164751)
Genome browser
AA seq
414 aa
AA seq
DB search
MYDRKILVEQTDPELFAAIQAENARQEHHIELIASENYASPAVMWAQGTQLTNKYAEGYP
GKRYYGGCEHVDVAEQLAIDRVKKIFGADAANVQPHCGASANEAVFLAFLKPGDTIMGMS
LAEGGHLTHGMPLNMSGKWFNVVSYGLDKNEAIDYDAMEAKAREHKPKLIVAGASAYSLH
IDFERFAKIAKEIGAIFMVDMAHYAGLIAAGVYPNPVPHADVVTSTTHKSLRGPRGGIIL
MKAEHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEALTPEFKAYQEQVVKNAKVVAETLT
QRGLRIVSGGTQSHVMLVDLRAKGITGKEAEAVLGAAHMTINKNAIPNDPEKPMVTSGVR
IGTPAMTTRGFKEEEARLTANLIADVLDNPRDEANIAAVREKVNALTARFPVYR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccgcaaaattcttgtcgaacaaaccgatcccgagctgtttgcagccatccag
gccgaaaacgcccgccaagagcaccacatcgagctgatcgccagcgagaactacgcctcc
cccgccgtgatgtgggcgcaaggcacccagctcaccaacaaatacgccgaaggctaccca
ggcaagcgctactacggtggctgcgagcatgtggacgtggccgagcaactggccatcgac
cgcgtgaagaagatctttggcgccgatgctgccaacgtgcaaccccattgcggcgcatct
gccaatgaagccgtgttcctggccttcctgaagcccggcgacaccatcatgggcatgagc
ctggccgaaggcggccacctgacccacggcatgccgctgaacatgtcgggcaagtggttc
aacgtggtcagctacggtctggacaagaacgaagccattgactacgacgcgatggaagcc
aaggcccgcgagcacaagcccaagctgatcgtggctggggcatctgcttacagcctgcac
atcgatttcgagcgctttgccaagatcgccaaggaaatcggcgccatcttcatggtggac
atggcccactacgccggcctgatcgctgcgggtgtgtaccccaaccccgtgccccacgcc
gacgtggtcacatccaccacgcacaagagcctgcgcggcccccgtggcggcatcatcctg
atgaaggccgaacacgagaaggccatcaacagcgccatcttccccggcctgcaaggcggc
cccctgatgcacgtgattgccgcgaaggccgtggccttcaaggaagcgctgacgcccgag
ttcaaggcctaccaggaacaagtggtgaagaacgccaaggtcgtggccgagacgctgaca
cagcgtggtctgcgcatcgtgagcggtggtacgcaaagccacgtgatgctggtagacctg
cgcgccaagggcatcaccggcaaggaagccgaggctgtgctgggcgctgctcacatgacc
atcaacaagaacgccatccccaacgaccctgaaaagccgatggtgaccagcggcgtgcgc
attggcacacccgccatgaccacccgtggcttcaaggaagaagaagcgcgcctgacggcc
aacctgatcgctgacgtgctggacaacccacgcgatgaagcgaacatcgcagccgtgcgc
gaaaaggtcaacgccctgactgcacgcttccctgtctaccgctaa
DBGET
integrated database retrieval system