Acidovorax temperans: PQV96_05860
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Entry
PQV96_05860 CDS
T08827
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
atem
Acidovorax temperans
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atem03009
]
PQV96_05860 (rimO)
Enzymes [BR:
atem01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PQV96_05860 (rimO)
Ribosome biogenesis [BR:
atem03009
]
Prokaryotic type
ribosomal protein modification factors
PQV96_05860 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WCT25543
LinkDB
All DBs
Position
1256384..1257775
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AA seq
463 aa
AA seq
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MSEALSPTKTPKVGFVSLGCPKALTDSELILTQLSAEGYETSKTFEGADLVIVNTCGFID
DAVKESLDTIGEALAENGKVIVTGCLGARAGESGGNLVKDVHPSVLAVTGPHATQEVMEA
VHAHLPKPHDPFLDLVPGAFGEAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
PVGDVLKEAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLELVQTLGEI
AEPYGAWVRLHYVYPYPSVDEVIPLMATGRVLPYLDVPFQHSHPDVLKRMKRPASGERNL
ERIQRWREACPEIVIRSTFIAGFPGETEEEFQHLLDFVREAQIDRAGCFAYSDVTGAVAN
ELPGMLPLEVREERRARFMAVAEEVSIAKLQRRVGATMQVLVDHAPAMGRKGGVGRTYAD
APEIDGTVQLLPPEKISKQLKVGEFTKARIVAVQGHDLVALPI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcactctcccccacaaaaacacccaaagtcggattcgtcagcctgggctgc
cccaaggcgctgacggactccgaactcatcctcacgcaactcagcgccgagggctacgaa
acctccaagaccttcgagggcgcggacctcgtcatcgtcaacacctgcgggttcattgac
gacgctgtgaaggaaagcctggacacgattggcgaggccctggccgaaaacggcaaggtc
atcgtcacgggctgcctgggtgcacgcgctggcgaaagcggcggcaatctggtcaaagac
gtgcaccccagcgtgctcgccgtcaccggcccacacgccacgcaagaggtgatggaggcg
gtacacgcccacctgcccaagccgcacgacccgttcctcgatctggtgcccggcgctttt
ggcgaggcgggcatcaagctcacgccgcgccactatgcgtacctgaagatcagcgaaggc
tgtaaccaccgctgcaccttctgcatcatcccttccatgcgcggcgacctcgtttcgcgc
cctgtgggtgatgtgctcaaggaagccaaggccctgtttgaaggcggcgtgaaggagctg
ctggtcatcagccaggacacctcggcctatggcgtggacgtgaagtaccgcaccggcttc
tgggatggcaagcccgtcaagacccgcatgctggaactggtgcagaccctgggcgagatt
gccgagccctacggcgcctgggtgcgtctgcattacgtgtatccgtaccccagcgtggat
gaagtgattccgctcatggccacaggccgcgtgctgccttacctggatgtaccgttccag
cacagccaccccgatgtgctcaagcgcatgaagcgccctgccagcggcgagcgcaatctg
gagcgcatccagcgctggcgcgaggcctgccccgagatcgtgatccgcagcactttcatt
gcaggcttccctggcgaaacggaagaagagttccagcacctgctggactttgtgcgcgaa
gcgcagatcgaccgtgcgggctgctttgcctacagcgacgtgacgggcgctgtggccaac
gagctacccggcatgctgcccctggaagtgcgcgaggagcgccgtgcgcgcttcatggcc
gtggccgaagaagtgtcgattgccaagctgcaacgccgcgtgggcgccaccatgcaggtg
ctggtggaccatgccccggccatggggcgcaagggtggcgtgggccgcacttacgccgat
gcgcccgagatcgacggtaccgtgcagttgctgccgcccgagaagatcagcaaacagctc
aaggtgggcgaattcaccaaggcccgcatcgtggcggtgcaggggcacgacctggtggcc
ttgccgatttga
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