Acidovorax temperans: PQV96_06350
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Entry
PQV96_06350 CDS
T08827
Name
(GenBank) DEAD/DEAH box helicase
Organism
atem
Acidovorax temperans
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
WCT25626
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All DBs
Position
1345508..1349074
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AA seq
1188 aa
AA seq
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MSDTFWFDPDSLRALCEDGPWMRGKALLAQGVVSEPDIEPLDEGWRIQALVQGTQHLPYE
VAVTLAVMPDGQVDYWRSVCDCPVGRQCKHAVALMLKAARLPLSDEARAAAAPRKDVSAA
AASLSARERMAAVQQAEAQAQLVNWLAALDRAAGGDVVLSPNGRSARPEQYLYLLSVVGG
MRQPTQLQLEAVVSYPKVTGGWAKPKQVRTQPAKGQAVYDQASETDRQVLQLLRAMPRSQ
VYYSAYSGAPCAVLEGQVGLLALQQAASTGRLFADAGGSTVGNALRWGPSRPLQWCWHEL
PAQPGALSAEPAWQLRAALAGGSGVLCHNSPPLFIDAERGECGPVELGSVSPAQLEVLLK
APALRESAIEKYQDEMARSLHQLPLPPVVQGVQRLQGVVPRPCLHLAPTPLADRPTLGLV
MARLTFDYAGHRGWWPGQGAQVMLPPLNGGDGPKVLLQRHPQAELEAIQKLMALGLLATD
DGVFGLPGERSQQAWLPWADAGFAVFIEAGFDVTQDPALQGWVSHAQNLTVALAPQPVAR
AARPGQEDPVEEPEPLSAFGQKQGRDGESEVMPDEMQDTSPWFSLSLGVELDGQRHNVLP
WLPDLIAQAAQHPPDAATGQPQLPPFVYVPRGDAQGGFVRLPTEPLRPWLAALLELVGER
GSDFAQPSLRLSRLEALRASATLGEGAVWQGAASLQALVQQLQGASPIAEVPVPASVHAS
LRPYQQQGLNWLQFLRAQGLGGILADDMGLGKTLQTLAHIQVEKDAGRLTAPALVIAPVS
LMGNWHSEAARFCPGLRTLVLHGAGRHEMADSVAEHDLVIAPYSLLQRDRERWLQLQWHL
VVLDEAQNIKNASTNAAQVVSALQARHRLCLSGTPMENHLGEIWSLFHFLMPGFLGSQQR
FRELFRNPVEKQGDTGRLAQLRARVAPFMLRRTKALVAAELPPKVETVMRVELTGAQADL
YETIRLGMEKTVREALHSKGLAKSQITILDALLKLRQVCCDPHLVPLESARQVRESAKMA
QLMELLPEMLAEGRRVLLFSQFTSMLGLIEAELKARGLPWVKLTGQSQKRDEIIQRFTSG
EVPLFLISLKAGGVGLNLPQADTVIHYDPWWNPAAEAQATDRAHRIGQTQNLWVVKMVAQ
GTIEERILALQERKAQLAQSIYGGEAARREPLFTESDLQQLLQPLGAD
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacacgttctggtttgaccccgactctttgcgcgctctgtgcgaggacggcccc
tggatgcgtggcaaggccctgctggcacagggcgtggtgagcgagccagacattgagccg
ttggacgaaggctggcgcatacaggccctggtgcagggcacgcagcacctgccgtatgaa
gtggccgtcaccctggcggtgatgcccgatggccaggtggactactggcgtagcgtgtgc
gactgccccgtgggccgccagtgcaagcatgcggtggcgttgatgctgaaggcggcccgt
ctgccgctgagcgatgaagcccgcgctgccgcagccccgcgcaaggatgtgagcgcggcg
gcggcgtccttgtcggcccgcgaacgcatggccgccgtgcagcaggccgaggcccaggcc
cagctggtgaactggctggccgcgctggaccgcgccgccgggggcgatgtggtactcagc
cccaatggccgcagtgcgcggccggagcaatatctctatttgctgtcggtggtgggcggc
atgcgccagcccacccagttgcagcttgaagccgtggtgtcttaccccaaggtgaccggt
ggctgggccaagcccaagcaggtgcgtacccagcccgccaagggccaggcggtgtacgac
caggccagcgagaccgatcgccaggtgttgcaactgctgcgcgctatgccgcgcagtcag
gtgtattactcggcctacagcggcgcgccctgcgcggtgctggaagggcaggtgggtttg
ctggcgctgcaacaggccgccagcaccgggcggctgtttgccgatgcgggtggatctacc
gtgggcaacgccctgcgatggggcccctcacgccccttgcagtggtgttggcacgagctg
cccgcccagcccggggctttgtcggccgagcccgcttggcaactgcgcgctgctcttgcc
ggtggcagcggtgtgctgtgccacaacagcccgcccttgttcatagatgccgagcggggc
gaatgcgggccggtagagctgggctctgtatcacccgcacagctggaggtgctgctcaag
gcccctgcgctgcgcgagtcggccatcgaaaaataccaggatgaaatggcccgcagcctg
caccaactgcccctgcccccggtggtgcaaggcgtgcagcggttgcagggcgtggtgccc
cggccttgcctgcacctggcccccacgccgctggccgaccggcccacgctgggcctggtg
atggcgcggctcacctttgactatgccggccaccgtggctggtggccagggcagggcgcg
caggtgatgttgccgccgctgaatgggggcgatggccccaaggtgctgctgcagcgccac
ccccaggccgagctggaagccatccaaaaactgatggcgctgggcctgctggccaccgac
gacggcgtgtttggcctgcccggcgagcgctcgcagcaggcctggctgccgtgggccgat
gcgggctttgcggtgtttatcgaagcagggtttgacgtgacccaggacccggcgctgcag
ggctgggtaagccatgcgcaaaacctgacggtggcgctcgcgccgcagccggtggctcgc
gctgccaggcctgggcaagaagatccggtcgaagaaccggaaccactcagcgcctttgga
cagaagcaggggcgcgatggcgagtcagaagtgatgccggatgagatgcaagacacctcg
ccctggttctcgctctcactgggcgtggaactggacggccagcgccacaacgtgctgccc
tggctgcccgacctgatcgcccaggccgcgcagcacccgccagatgccgccaccgggcag
ccccaactgccgccgtttgtctacgtgccgcgtggcgatgcccaaggcggctttgtgcgc
ctgcccaccgagccgctgcgcccctggctggccgccttgctggaactggtgggcgagcgg
ggctcggattttgcccaacccagcctgcgcttgtcgcgcctggaagccttgcgagccagt
gccaccctgggcgaaggcgctgtgtggcagggtgctgcatcgttgcaggccctggtgcag
cagctacagggcgcgagccccatcgccgaggtgcccgtgcctgccagcgtgcacgccagc
ctgcgcccgtaccagcagcaggggctgaactggctgcagtttctgcgcgcccagggccta
ggcggcatcctggccgacgacatgggcctgggcaaaacgctgcaaaccctggcccacatc
caggtcgaaaaagacgcaggccgcctcacggcccccgcgctggtgatcgccccggtgagc
ctgatgggcaactggcacagcgaagccgcgcggttttgccccggtctgcgcaccctggtg
ctgcacggcgcaggccgccatgaaatggcggattccgtggccgagcacgatctggtcatc
gccccttattcattgcttcagcgcgaccgtgagcgctggctgcaactgcagtggcacctg
gtggtgctggacgaggcgcaaaacatcaagaacgccagcaccaacgcggcccaggtggtg
tcggcactgcaggcgcgccaccggctgtgcctgtcgggcacgcccatggaaaaccacctg
ggcgaaatctggagtctgttccacttcctgatgcccggctttttgggcagccagcagcgg
tttcgcgagctgtttcgcaaccccgtagaaaaacagggtgacaccggacggctggcccaa
ttgcgtgcccgcgtagcgccgttcatgctgcgccgcactaaggccttggtggcggccgag
ctgccccccaaggtggaaaccgtgatgcgggtggagctgacgggcgcccaggccgatctg
tacgaaaccatccgcttgggcatggaaaaaaccgtgcgcgaagccctgcattccaaaggc
ttggccaagtcgcagatcacgatcctggatgcgctgctcaagctgcgccaggtctgctgt
gacccgcacctggtgccgctggagtccgcccgccaggtgcgcgaatcggccaagatggcg
cagttgatggagcttttgcccgaaatgctggccgaggggcggcgggtgctgctgttttcg
cagttcaccagcatgctcggcttgatcgaggcggagctcaaggcccggggcttgccctgg
gtcaagctcaccggccaaagccaaaagcgcgatgagatcatccagcgattcaccagcggc
gaggtgccgctgttcctcatcagcctgaaggcgggcggtgtggggctgaacctgccccag
gccgataccgtcatccactacgacccctggtggaaccccgctgccgaagcgcaggccacc
gaccgcgcccaccgcatcggccagacgcagaacctgtgggtggtgaaaatggtggcccag
ggtacgattgaggagcgcattttggccttgcaggagcgcaaggcacagctggcccagtcc
atctacgggggcgaagcggcccgccgcgaaccgctgttcaccgagagcgaccttcagcag
ctgttgcagcccttgggagcagactga
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