Acidovorax temperans: PQV96_14320
Help
Entry
PQV96_14320 CDS
T08827
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
atem
Acidovorax temperans
Pathway
atem03420
Nucleotide excision repair
atem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PQV96_14320
03430 Mismatch repair
PQV96_14320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atem03400
]
PQV96_14320
Enzymes [BR:
atem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQV96_14320
DNA repair and recombination proteins [BR:
atem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PQV96_14320
MMR (mismatch excision repair)
Other MMR factors
PQV96_14320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WCT23262
LinkDB
All DBs
Position
complement(3054275..3056764)
Genome browser
AA seq
829 aa
AA seq
DB search
MFPHDLFSGAPDESVPPSAAAPLGVPASSPLLAGLNPEQLAAVTLPNGHALILAGAGSGK
TRVLTTRIAWLLQHGHVTPGGILAVTFTNKAAKEMVARLTTMLPVNVRGMWIGTFHGLCN
RLLRAHHKAAGLPQAFQILDTQDQLSAIKRLCKQFNVDEERFPPKQLAYFIAGCKEEGMR
PGDVPAHDADGRKKIELYQLYEEQCQREGVVDFGELMLRSYELLRDNDPIREHYQRRFRH
ILVDEFQDTNRLQYLWLKQIAGDEVAGRLQSHASVMAVGDDDQSIYAFRGARVGNMADFV
REFDVQHQIKLEQNYRSYSNILDSANHLISHNSRRLGKNLRTTQGAGEPVRVYEASSDLA
EAQWMVDEIKQLVRSDGFERKEIAVLYRSNAQSRVIESALFNASVPYRVYGGLRFFERAE
IKHALAYLRLLENPNDDTSFLRVVNFPPRGIGARSIEVLQDAARAAGCSLHDAVSAVPGK
AGTNFKAFVAMIDVLREQTEGQSLRGIIEQMLESSGLVEHFRTEKEGADRIENLQELVNA
AESFVTQEGFGRDAVALPLDEHGQPLTQSVPTQSPVCQGLDPNAPVLDEPLKPTNPATPA
GIIDADTGETLSPLVAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDGVFIGGLEE
GLFPHDNSSSDRDGLEEERRLMYVAITRARKRLYLSHSQTRMLHGQTRYNVKSRFFDELP
EECLKWITPKQQGFGSYAPNSGAGSAYQSGARSQFGFKSETFASPPVPPQKAAPSHGLRA
GLAVFHTKFGEGKVLAIEGTGDDARAQVNFPRHGTKWLALSVAKLTVVD
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgttcccacacgatctgttttcaggggcgcccgatgagtcggtgcccccatccgctgct
gcaccattgggcgtgcctgcttcgtcgcccttgctggccggcctcaaccccgaacaactc
gccgccgtcaccctgcccaacgggcacgccttgattctggcgggggcgggctcgggcaag
acgcgcgtgctcaccacccgcattgcctggctgctgcagcatggccacgtcacacccggc
ggtatcctggccgtgaccttcacgaacaaggccgccaaggagatggtggcgcgccttacc
accatgctgccggtgaacgtgcgcggcatgtggattggcaccttccatggcctgtgcaac
cgccttttgcgcgcacaccacaaggctgcgggcctgccgcaggcgttccagattctggat
acgcaagaccagctctccgccatcaagcggctgtgcaagcagttcaatgtggatgaggag
cgctttccgcccaagcagctcgcctacttcattgcgggctgcaaggaagagggcatgcgc
cccggcgatgtgcccgcgcacgatgccgatggccgcaagaagatcgagctgtaccagctc
tacgaagaacagtgccagcgcgaaggcgtggtggattttggcgagctgatgctgcgctct
tacgagctgctgcgcgacaacgatcccatccgcgagcattaccagcggcgcttccgccac
atcctggtcgatgagtttcaggacaccaaccgcctgcagtacctgtggctcaagcagatt
gcgggcgacgaagtggcgggccgcctgcaaagccacgccagcgtgatggccgtgggcgac
gacgaccagagcatctacgcctttcgcggcgcgcgcgtgggcaacatggccgactttgtt
cgcgagtttgacgtgcagcaccagatcaagctggagcagaactaccgcagctacagcaac
atcctcgactccgccaaccacctcatcagccacaacagccgccgcctgggcaagaacctg
cgcaccacgcagggcgcgggcgagcccgtgcgcgtgtacgaggccagctctgacctggcc
gaggcgcagtggatggtggacgagatcaagcaactggtgcgcagcgacggctttgagcgc
aaggaaatcgctgtgctctaccgcagcaacgcgcaaagccgggtgatcgaatcggccctg
ttcaatgccagcgtgccctaccgcgtgtacggcggcctgcgcttttttgaacgcgcagaa
atcaagcacgcgctggcctacctgcgcctgctggagaacccgaacgacgacaccagcttt
ttgcgcgtcgtcaatttcccgccgcgcggcattggcgcgcgcagcattgaagtgctgcaa
gacgcagcccgcgccgcaggctgctcgttgcacgatgccgtgagcgccgtgccgggcaag
gccggaaccaacttcaaggccttcgtcgccatgatcgacgtgctgcgcgagcagaccgaa
ggccagtcgctgcgcggcatcatcgagcagatgctggaatctagcgggctggtggagcac
ttccgtaccgaaaaagaaggcgcagaccgcatcgagaacttgcaggaactggtcaacgcc
gccgaaagcttcgtcacgcaagaaggctttggccgcgatgccgtggccctgccgctggat
gagcacggccagccgctcacgcagagcgtgcccacccaaagcccggtatgccaaggcctg
gacccgaacgccccggtgctggacgagccgctcaagcccacgaaccccgccacccccgca
ggcatcatcgacgccgacacgggcgaaaccctctcgccgctggtcgccttcctcacccat
gccgcgctggaggcgggcgacaaccaggcccaggccgggcaagacgccgtgcagctcatg
accgtgcacgccagcaaggggctggagtttgacggcgtgttcatcggcggcctggaagag
ggcctgttcccgcacgacaactcctccagcgaccgcgacgggctggaagaagagcgccgc
ctgatgtacgtggccatcacccgcgcccgaaagcgcctgtacctcagccattcgcaaacg
cgcatgctgcacggccagacgcgctacaacgtcaagagccgcttttttgacgaactgccc
gaggagtgcctgaagtggatcacgcccaagcagcaaggctttggctcgtatgctcctaat
tcaggagctggtagcgcttaccagtcgggcgctagaagccaatttggcttcaagtctgaa
acctttgccagcccgccggtgcccccacaaaaagcggcaccttcgcacggcctgcgcgca
ggtctggccgtgttccacaccaagtttggcgaaggcaaggtgctggccattgaaggcacg
ggtgacgacgcgcgcgcccaggtcaatttcccccgccacggcaccaagtggctggcgttg
agcgtggcgaagctgacggtggtggattga
DBGET
integrated database retrieval system
